Gene Ppro_3005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_3005 
Symbol 
ID4574345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand
Start bp3278009 
End bp3278875 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content67% 
IMG OID639757059 
ProductHemK family modification methylase 
Protein accessionYP_902660 
Protein GI118581410 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID[TIGR00536] HemK family putative methylases
[TIGR00537] HemK-related putative methylase
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGATC AGGAAACCTG GACCACTCTC AGGATTCTCA CCTGGACCAA GGAGTACTTT 
GGCGCCCGGG GAATAGAAAA TGCCCGGCTG GAGGCCGAGT GGCTGCTCTG CGCCGCCACC
GGCCTGGACC GGGTCGGGCT GTACCTCAAC TACGACAAGC CGTTGAACCG CGAGGAACTG
TCCGCCTTTC GCCAGATGGT GGCCCGCCGG GCGCGGCGGG AGCCTCTGCA GCACATCCTC
GGCAGTCAGG AGTTCTGCGG CCTGGAGTTC GCGGTTTCGC CGGATGTGCT CATCCCGCGC
CACGATACGG AGACCCTGGT GGAAGAGGCG CTCAGGCGGG CGCCTCTGGC GCGTACGGTT
CTGGACATCG GCACCGGCAG CGGCTGCATC GCCGTCAGCC TGGCAAGGCG CCTGCCAGGT
GCCCGGATCG TGGCGAGCGA CATCTCTGCC GTGGCGCTGG AAATGGCCCG CGCTAACGCC
CGGGCCAATG GGGTGGATGT GGAATTCCTG CACGGCTCGC TGCTGGAGCC GGTTGCCGGG
CGTTGCTTCG ACCTGATCGT CTCCAACCCT CCCTACATTC CCAGCGCGGA TATCCAACTG
CTGGAGCCGG AGGTGCGGGA CGGCGATCCA CGGCTGGCCC TGGACGGCGG GCCGGACGGA
CTGGACATCT ATCGACGCCT GATCCCGGCC AGCCTGGAGC ATCTGGAACC GGGCGGCTGG
CTGCTGCTGG AGGTGGGCAT GGGGCAGGCG CAGGACGTGG CGGAGATGTT CCCCCTGGCT
GACGGGTATG GCCAGGTCGT TAGCTCCCCC GATCCCGGGG GGATTGAGCG GGTGGTGGGA
GCGGCACGAA AGGTGGAATT GACATGA
 
Protein sequence
MTDQETWTTL RILTWTKEYF GARGIENARL EAEWLLCAAT GLDRVGLYLN YDKPLNREEL 
SAFRQMVARR ARREPLQHIL GSQEFCGLEF AVSPDVLIPR HDTETLVEEA LRRAPLARTV
LDIGTGSGCI AVSLARRLPG ARIVASDISA VALEMARANA RANGVDVEFL HGSLLEPVAG
RCFDLIVSNP PYIPSADIQL LEPEVRDGDP RLALDGGPDG LDIYRRLIPA SLEHLEPGGW
LLLEVGMGQA QDVAEMFPLA DGYGQVVSSP DPGGIERVVG AARKVELT