Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_2904 |
Symbol | |
ID | 4574784 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | + |
Start bp | 3177148 |
End bp | 3178137 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639756956 |
Product | secretion protein HlyD family protein |
Protein accession | YP_902559 |
Protein GI | 118581309 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.839486 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAGGA AGGTTCTGAT TGCGCTGCTG CTCGGCATCA CCGTGGCTGC AACGCTGTTT TTCGTGTTCC GGCGCCCCTC CGGAAGGGAG GATGGGCTCA AGGTGTCCGG TACCATCGAA GTCACCTCCG TGGAACTCTC CTTCAAGGTC GGCGGCCGGA TGAGCCGGCG CTTGGTGGAC GAGGGAGAGA TGGTGACAGC CGGACAACTG GTGGCCCAAC TGGAGGACGA CGAACTGCGT GAGGAGCTGA ACACCCGTTC GGCCGAACAG CGAGCGGCCA GGGCCATGCT GGCGGACCTC AAGGCCGGCA GCCGCCGCGA GGAGATCAGG CAGGGGGAAG AGGTACTGGC GCGCACAAGG GCCGAGGCCG AGCGGCTCTC CCGCGACGCC CTGCGCATGG AAAAGCTCTA CCGGCGCGAT GTCATCCCGC TCAGGGAGCT AGAGGCGGCC CGTGCCGGCC GCGACTCATC CGCGGCCGCG GTGCGTGAGG CAGAGGAGCG CCTGCGGCTG CTGCGCATCG GTCCCCGCCC CGATGCGGTG CGGGAGCGGA GCGCCCGGGT CGAGGCGGCC GAGGCCGGCC TCTCCCTGGC CGAGACGCGG CTCTCCCACA GCATCCTCAA CGCCCCGGCG GCCGGACTGA TCCTGTCCAA GCACGCCGAA GCGGGCGAGA TGCTGGCCCC CGGTTCACCG GTGCTCACCC TGGGGGTGAT GGATCAGGTC TGGCTGCGGG CTTACATCCC CGAGGGCGAT TTGGGACGGG TGGTGGTGGG ACAGAAGGCG CGGGTCAGCG TCGACTCCTG GCCGGGACGC TCCTTCCCGG GGCGGGTCAG CTTCATATCG TCCCAGGCCG AATTCACCCC CAAGAACGTG CAGACCGAGA AGGAGCGGGT CAAGCTGGTC TACCGCATCA AGATCACCCT GGACAACCCG AAGATGGAGC TGAAACCGGG CATGCCGGCC GACGCGCTGA TCGAGACCAG CTCCCCGTGA
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Protein sequence | MKRKVLIALL LGITVAATLF FVFRRPSGRE DGLKVSGTIE VTSVELSFKV GGRMSRRLVD EGEMVTAGQL VAQLEDDELR EELNTRSAEQ RAARAMLADL KAGSRREEIR QGEEVLARTR AEAERLSRDA LRMEKLYRRD VIPLRELEAA RAGRDSSAAA VREAEERLRL LRIGPRPDAV RERSARVEAA EAGLSLAETR LSHSILNAPA AGLILSKHAE AGEMLAPGSP VLTLGVMDQV WLRAYIPEGD LGRVVVGQKA RVSVDSWPGR SFPGRVSFIS SQAEFTPKNV QTEKERVKLV YRIKITLDNP KMELKPGMPA DALIETSSP
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