Gene Ppro_2904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_2904 
Symbol 
ID4574784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand
Start bp3177148 
End bp3178137 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content68% 
IMG OID639756956 
Productsecretion protein HlyD family protein 
Protein accessionYP_902559 
Protein GI118581309 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.839486 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAGGA AGGTTCTGAT TGCGCTGCTG CTCGGCATCA CCGTGGCTGC AACGCTGTTT 
TTCGTGTTCC GGCGCCCCTC CGGAAGGGAG GATGGGCTCA AGGTGTCCGG TACCATCGAA
GTCACCTCCG TGGAACTCTC CTTCAAGGTC GGCGGCCGGA TGAGCCGGCG CTTGGTGGAC
GAGGGAGAGA TGGTGACAGC CGGACAACTG GTGGCCCAAC TGGAGGACGA CGAACTGCGT
GAGGAGCTGA ACACCCGTTC GGCCGAACAG CGAGCGGCCA GGGCCATGCT GGCGGACCTC
AAGGCCGGCA GCCGCCGCGA GGAGATCAGG CAGGGGGAAG AGGTACTGGC GCGCACAAGG
GCCGAGGCCG AGCGGCTCTC CCGCGACGCC CTGCGCATGG AAAAGCTCTA CCGGCGCGAT
GTCATCCCGC TCAGGGAGCT AGAGGCGGCC CGTGCCGGCC GCGACTCATC CGCGGCCGCG
GTGCGTGAGG CAGAGGAGCG CCTGCGGCTG CTGCGCATCG GTCCCCGCCC CGATGCGGTG
CGGGAGCGGA GCGCCCGGGT CGAGGCGGCC GAGGCCGGCC TCTCCCTGGC CGAGACGCGG
CTCTCCCACA GCATCCTCAA CGCCCCGGCG GCCGGACTGA TCCTGTCCAA GCACGCCGAA
GCGGGCGAGA TGCTGGCCCC CGGTTCACCG GTGCTCACCC TGGGGGTGAT GGATCAGGTC
TGGCTGCGGG CTTACATCCC CGAGGGCGAT TTGGGACGGG TGGTGGTGGG ACAGAAGGCG
CGGGTCAGCG TCGACTCCTG GCCGGGACGC TCCTTCCCGG GGCGGGTCAG CTTCATATCG
TCCCAGGCCG AATTCACCCC CAAGAACGTG CAGACCGAGA AGGAGCGGGT CAAGCTGGTC
TACCGCATCA AGATCACCCT GGACAACCCG AAGATGGAGC TGAAACCGGG CATGCCGGCC
GACGCGCTGA TCGAGACCAG CTCCCCGTGA
 
Protein sequence
MKRKVLIALL LGITVAATLF FVFRRPSGRE DGLKVSGTIE VTSVELSFKV GGRMSRRLVD 
EGEMVTAGQL VAQLEDDELR EELNTRSAEQ RAARAMLADL KAGSRREEIR QGEEVLARTR
AEAERLSRDA LRMEKLYRRD VIPLRELEAA RAGRDSSAAA VREAEERLRL LRIGPRPDAV
RERSARVEAA EAGLSLAETR LSHSILNAPA AGLILSKHAE AGEMLAPGSP VLTLGVMDQV
WLRAYIPEGD LGRVVVGQKA RVSVDSWPGR SFPGRVSFIS SQAEFTPKNV QTEKERVKLV
YRIKITLDNP KMELKPGMPA DALIETSSP