| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_2891 |
|---|
| Symbol | |
|---|
| ID | 4574771 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 3163631 |
|---|
| End bp | 3164482 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639756943 |
|---|
| Product | TonB family protein |
|---|
| Protein accession | YP_902546 |
|---|
| Protein GI | 118581296 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
|---|
| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAGC GATACGTAGA AAAAACATTC CTCTACCTGC TGATCTTCTC GCTTCTGCTG
CACCTGGGAG TGTTTGCCCT GCTCTTGTAC CTGCCGCCGA AGAAGCAGCC GCCTCCCAAG
GAACCGGTCT TCATTGACCT GCAACAGATG CCCGAGGCGA TGCTCCCCCG TGAGCCGGCT
CAGGCGGAGG TGCGGCGGCG CTCTGACCAG AGGAGGCGGG TGGAGCGCGA AGCAGCTCCG
CGGGGGAGAG ACAGCGTGGA CAGCGGCGTG CGGCCGCAAC CGCCGGTCAG CCGACCCCTT
CCGGGCCGGG CAGGCGAGCC GGGAAGCCCC TCCCTGCCCG GAGCGAGGCC TCAGCGGGAG
AGCCGGGTGA CCGAAGGGTC TTCGGTGGCC GGTCTTTTGA AGCCTCGTTC CCCTGCCGGA
CGACCCCAAG GGCAGCCGAG GCTGTTTCCC GGAGCCGGGG GGATGGCCAG GCTGGAGGAG
AACTATCGCC GCAAGTTTGA GAAGGATGTT GCCGAGGGGG ATACCAAGTT TCTCAATACC
GACGACATCC AGTTCGGTTC GTTCCTTCGG CGCTTCGAAA ATTCCGTCTA CGGTGTTTGG
CGCTATCCCG AGGAGGCCTC CAGAAACGGC ATCCAGGGGG TCACACCGGT CAGGATCACC
TTCAATCGGC GGGGAGAGGT CGTGCATGTG GAGCTTTTGG AGAGTTCTGG CGCCAAGGTG
CTGGATGACG AAGTATTCCG TACCCTGAAG CTGATCGGCC CGGTGGGCGG ATTTCCTCGC
GGGTATGACA AGGACGAGTT CCACCTGATA GCGTTCTTTC AGTATGGCAT GACAAGGAGA
TCCCTGAGAT GA
|
|---|
| Protein sequence | MSERYVEKTF LYLLIFSLLL HLGVFALLLY LPPKKQPPPK EPVFIDLQQM PEAMLPREPA
QAEVRRRSDQ RRRVEREAAP RGRDSVDSGV RPQPPVSRPL PGRAGEPGSP SLPGARPQRE
SRVTEGSSVA GLLKPRSPAG RPQGQPRLFP GAGGMARLEE NYRRKFEKDV AEGDTKFLNT
DDIQFGSFLR RFENSVYGVW RYPEEASRNG IQGVTPVRIT FNRRGEVVHV ELLESSGAKV
LDDEVFRTLK LIGPVGGFPR GYDKDEFHLI AFFQYGMTRR SLR
|
|---|
| |