| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_2886 |
|---|
| Symbol | |
|---|
| ID | 4573939 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | + |
|---|
| Start bp | 3157579 |
|---|
| End bp | 3159039 |
|---|
| Gene Length | 1461 bp |
|---|
| Protein Length | 486 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639756938 |
|---|
| Product | succinic semialdehyde dehydrogenase |
|---|
| Protein accession | YP_902541 |
|---|
| Protein GI | 118581291 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGAT TGCATGATCC CGCCCTGCTG AAATATCGGT GCCATATCAA CGGTCTTTGG
TGCGATGCCG ACTCCGGCGC CACCATCGAT GTCACCAACC CGGCCACCAG CGAGACCATC
GCCACCGTCC CCCGCATGGG GGCGGCCGAG ACCCGCCGGG CCGTCCGGGC CGCCGCCGTG
GCCCTGCCGG GGTGGAGCGC CACCCTGGCC CGGGAGCGGG CGCGCATCCT CAGACGCTGG
TTCGAGCTGA TCATGGCCAG CCAGGAGGAT CTGGCGCTGC TGATGACCTG CGAGCAGGGC
AAGCCGCTGG CCGAGTCACG GGGGGAGATC GCCTACGCCG CTTCCTTCAT CGAGTGGTTC
AGCGAGGAGG CGCCGCGCAT CGGCGGCAAC GTCATCATGC CCCACCAGCA CGACAAACGC
ATCCTGGTCG CCAAACAGCC GGTGGGGATC TGCGCCGCCA TAACCCCCTG GAACTTCCCC
TCGGCCATGA TCGCCCGCAA GGCGGGGGCG GCCCTGGCGG CCGGCTGCAC CATGGTGCTG
AAACCGGCCA GCATGACCCC CCTGTCGGCC CTGGCCCTGA TGGAGCTGGG GATTCGGGCT
GGCCTCCCCG CCGGGGTGCT CAATCTGGTC ACCGGTTCGG CGGCCGACAT CGGCGGGGAG
CTGACCTCCA ACCCCCTGGT GCGCAAACTG ACCTTCACCG GCTCCACCGA AATCGGCAAG
AAACTGATGG CCCAATGCGC CGCTACGGTG AAGAAACTCT CCCTTGAGCT GGGGGGAAAC
GCTCCCTTTA TCGTCTTCGA CGACGCCGAC CTGGACGCCG CGGTGGAGGG AGCCATGGTG
TCCAAGTTCC GCAACAGCGG CCAGACCTGC GTCTGCGCCA ACCGCTTTCT GGTGCACGAG
GCAGTCTACG ATGATTTCCG TGACCGGCTG GCTGCACGGG TGAGGAAGCT AAAAGTGGGG
GACGGCAGGG ACGAGTCGGT ACAGCAGGGG CCGCTGATGG AAATGGCCGC CCTGCTCAAG
GTGGAGGAGC TGATCAGCGA TGCCCTGGCC AGGGGTGCCC GTCTGGTGGT GGGGGGTGGG
CGGCATTCCC TGGGTGGCAC CTTCTTCCAG CCAACCGTGC TTGCCGAGGC GACGCCGGAG
ATGCAGATCG CCCGGGAGGA AACCTTCGGC CCGGTGGCGC CGCTGTTCCG TTTCTCCGGC
GAGGAGGAGG CCATCGCCCT GGCCAACGAC ACTCAGTCAG GCTTGGCCGC CTACTGCTAC
ACCCGGGATC AGGCGCGCTG CTGGCGGGTG CCAGAGGCCC TGGAGTACGG CATGGTCGGG
ATCAATACCG GCTTGATCTC CACGGCGGTG GCCCCCTTCG GCGGCATCAA GGAGTCCGGT
CTGGGGCGGG AGGGGTCGGC CTATGGCATC GACGAATACC TGGAGATCAA GTACGTCTGC
GTGGGGGGGG GAATCGCCTG A
|
|---|
| Protein sequence | MTGLHDPALL KYRCHINGLW CDADSGATID VTNPATSETI ATVPRMGAAE TRRAVRAAAV
ALPGWSATLA RERARILRRW FELIMASQED LALLMTCEQG KPLAESRGEI AYAASFIEWF
SEEAPRIGGN VIMPHQHDKR ILVAKQPVGI CAAITPWNFP SAMIARKAGA ALAAGCTMVL
KPASMTPLSA LALMELGIRA GLPAGVLNLV TGSAADIGGE LTSNPLVRKL TFTGSTEIGK
KLMAQCAATV KKLSLELGGN APFIVFDDAD LDAAVEGAMV SKFRNSGQTC VCANRFLVHE
AVYDDFRDRL AARVRKLKVG DGRDESVQQG PLMEMAALLK VEELISDALA RGARLVVGGG
RHSLGGTFFQ PTVLAEATPE MQIAREETFG PVAPLFRFSG EEEAIALAND TQSGLAAYCY
TRDQARCWRV PEALEYGMVG INTGLISTAV APFGGIKESG LGREGSAYGI DEYLEIKYVC
VGGGIA
|
|---|
| |