| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_2883 |
|---|
| Symbol | |
|---|
| ID | 4573936 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 3154205 |
|---|
| End bp | 3154945 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639756935 |
|---|
| Product | DNA repair protein RecO |
|---|
| Protein accession | YP_902538 |
|---|
| Protein GI | 118581288 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1381] Recombinational DNA repair protein (RecF pathway) |
|---|
| TIGRFAM ID | [TIGR00613] DNA repair protein RecO |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.108982 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATCCGG AAAAACTCCA GGCATACGTC CTGTCAACCC TCGATTACGG CGACAGCGAC
CGGATCGTAG CGCTCTTCAC CCTTGAGCAT GGACGGATCA AGGCCTTTGC CCGGCGGGCC
AGGAACAGCC GCAGGCGTTT CGGCGCCGCT CTTGAGATCT TCGCCCGTAT CGAGGCACAT
GTGGAAATCA AGCAGGGGGG GCTTTCCGGG CTGCGTCAGG CGGAGATCGA CTGCATCTAC
CCCGGCATCC GCGGCGATCT GGGACGGATT GCCTATGCCC TGTACGCCTG CGAACTGGTG
GATGCCATGA CCCCCGAAGG TCATCCGCTG CCGCGCCTGT TCCGTCTGCT GGCGGCATAC
CTGGACAGGC TGGAGGCGTA TCCCGCCAGC GAGCAAGAAC GCCGTTTCTT CGAGATCAAC
CTGCTCAACA TCCTGGGCTA CCGCCCATCC CTGGAAGCGT GCAGCCGTTG TGGAACGCCC
TTTGACGACC GGGGCGCCTT GCTGCTGGAT GACGGAGAAC TGGTCTGCCG CGCCTGCACC
GGCCATGGCA GGGATATGAC GCAGGTGACA CTGGGGCGGA TGCTGGCCTG CCTCAAGACC
GGAACATTCG GACTGATCCA CTTTCCGGAC GAGGCGCAGG CCCAGACAGG CAGTGCATTG
GACCGAGCCC TGGCCTTCCA TGCCGGCCAC CGCCTGAAGA GCCTGGAGTT TCTGCGCCAG
ATAAGCAACG AGAACCAATG A
|
|---|
| Protein sequence | MHPEKLQAYV LSTLDYGDSD RIVALFTLEH GRIKAFARRA RNSRRRFGAA LEIFARIEAH
VEIKQGGLSG LRQAEIDCIY PGIRGDLGRI AYALYACELV DAMTPEGHPL PRLFRLLAAY
LDRLEAYPAS EQERRFFEIN LLNILGYRPS LEACSRCGTP FDDRGALLLD DGELVCRACT
GHGRDMTQVT LGRMLACLKT GTFGLIHFPD EAQAQTGSAL DRALAFHAGH RLKSLEFLRQ
ISNENQ
|
|---|
| |