Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_2857 |
Symbol | |
ID | 4571621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | - |
Start bp | 3127134 |
End bp | 3127526 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 639756910 |
Product | transposase IS200-family protein |
Protein accession | YP_902513 |
Protein GI | 118581263 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1943] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.999243 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGACG CTCAAAGTTT ATGTCACTCG AAATGGGATT GCAAGTATCA CATCGTATGG GTTCCCAAAT GTCGCCGTAA GGTGTTGTAC GGGCGGATTC GGAAACATCT TGCTGACTTG TTGCACTGTC TTGCGAGACA GAAAGAGTGC AAAATACAGG AGGGTCACCT TCAACCTGAC CATATTCACA TATTGATATC GATCCCACCG AAATACTCTG TTGCACAGGT GATTGGCTTC ATCAAGGGCA AGAGTGCCAT CCATATTGCC CGAATGTATC TTGGTCAGAA GAAGAACTAT ACTGGCATGC ACTTTTGGGC ACGTGGTTAC TTCGTATCAA CCGTTGGTGC TGACGAGGAA ATGAGGCTGA TCAGAAAAAT TGATGGAAAT TAG
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Protein sequence | MDDAQSLCHS KWDCKYHIVW VPKCRRKVLY GRIRKHLADL LHCLARQKEC KIQEGHLQPD HIHILISIPP KYSVAQVIGF IKGKSAIHIA RMYLGQKKNY TGMHFWARGY FVSTVGADEE MRLIRKIDGN
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