Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_2849 |
Symbol | |
ID | 4574869 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | + |
Start bp | 3117922 |
End bp | 3119391 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639756902 |
Product | fibronectin, type III domain-containing protein |
Protein accession | YP_902505 |
Protein GI | 118581255 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00390509 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATAGACG ACAATACTAA ACCATTCGCG AGAATGGGAC GGAAAGCCTA CAGGGTCTCA CCGAGACAGC CGGGTCGCCG AAATATCCAA CTCAGATATT CGGCCCCGGC TTTTTTATTG CCTGCGACAC AATGTCGCGG CTCTTATGAC AACAGCATAC AGGAGGGTAT GATGACGGGA ATATGCTCAA TAGAATCAAG TACTAAGAAT ATATCGCGTG ATTCGGGAGG TGGTGGGAGA GCAGAAAGCA ATATCAGTTG TACGCCTGAA AAAGGCAAAC CATTCGAAAG GATGGGGCGC AAAACCACTG GTCTAAATCC CGGAAATTCG GGACATGACA GCAGGGCTGC CGGGCTTAAG CAGTACCTCC TTGTGAGGTG CGGTTTGCTC AGGCACAGAC AACAAGGAGA AATCTGCATG AAATCAATTG GTTCAGTAGT TGCGGTGCGA AGGGCAGTAG GCACATCGAA ATCAGGCTTC TTGCGGGCCA CAGGACTATT GCGTGTTGGG GTTTTTGCAT TTGTAGCAGC ATGTACGCTT GTTTATCCGC TGAAGGCCCA TGCGGCCCAG ACAACCCTCG GATGGGCAGC CACTACGAGT TCAAATGTTT CCGGGTACAA GTTGTACTAC GGCAACACCT CAGGTACGTA CTCACAATCT GTGGATGTGG GAAACACGAC AAGTTATACT ATGAGTAACC TGACTGCTGG AAAAACTTAT TATTTTGCTG CTGTCGCCTA TGATGTGTCT GGAAATCAAA GCGATTACTC CAACGAGGTG AGCAAAAGCA TACCGCTGGT TCAATATACT GTAACCGCCA GTGCGGGAAC TGGGGGCTCA ATTTCCCCCT CCGGTTCGAC TACCCTCAAT TCCGGAGCAA GTAAGACGTA TACCATTGTC CCTGCTACAG GTTACAAGAT AGCTGATGTG AAAGTCGACG GTACATCAGT CGGTGCGGTC AGTACCTACA CATTTGGCAA CGTAACCGCG AGCCATACCA TTTCCGCCAC CTTCTCGGCA CAGGTAACTA CCATAACCCC TCACTGGAAC GATGCGACAA CCAAGAATAC GACCATGCTC ACCGCTAGTC CTAAATACAT GGTATGGAGC CCTGTTGTGG CCGATGCAAC GGCAAAGGTG ACGAGCTTGA GGGTGAATAT AGGTCTTTAC GGCCAAGCAA CTCAGGTCAG GCTGGCACTT TATGACAAAA GCGGTAAAAA AATGACCGAG GGGACCGGTA CTGTTTCAGC GGCAGGATAT AAATCCATAA CCGTTCCATT AGTGAGTGTT ACCAAGGGCA ATACCTATTT CATAGCAATA CAGGCAGCTT CCAGCATGCT CAAAAAATTC AACTGCGGTG CTTCCACAGG AGGATATGCG GCTAAGAATA CATACTCAAA TGGGTTTCCA AGCAGTCTGC CCAAAGGGTG GAGTGATTAT TTGGTCACTT CTGGAATGTT TGTACAGTAA
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Protein sequence | MIDDNTKPFA RMGRKAYRVS PRQPGRRNIQ LRYSAPAFLL PATQCRGSYD NSIQEGMMTG ICSIESSTKN ISRDSGGGGR AESNISCTPE KGKPFERMGR KTTGLNPGNS GHDSRAAGLK QYLLVRCGLL RHRQQGEICM KSIGSVVAVR RAVGTSKSGF LRATGLLRVG VFAFVAACTL VYPLKAHAAQ TTLGWAATTS SNVSGYKLYY GNTSGTYSQS VDVGNTTSYT MSNLTAGKTY YFAAVAYDVS GNQSDYSNEV SKSIPLVQYT VTASAGTGGS ISPSGSTTLN SGASKTYTIV PATGYKIADV KVDGTSVGAV STYTFGNVTA SHTISATFSA QVTTITPHWN DATTKNTTML TASPKYMVWS PVVADATAKV TSLRVNIGLY GQATQVRLAL YDKSGKKMTE GTGTVSAAGY KSITVPLVSV TKGNTYFIAI QAASSMLKKF NCGASTGGYA AKNTYSNGFP SSLPKGWSDY LVTSGMFVQ
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