| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_2769 |
|---|
| Symbol | |
|---|
| ID | 4574134 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 3029871 |
|---|
| End bp | 3030827 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639756823 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_902426 |
|---|
| Protein GI | 118581176 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGGGAGC CGGAGGGGGC AGTTCCTTTA TCCCCTGGGC TGACCGTAGC CCTTACCGGA
GGGACCGGGT TCGTCGGCGG TGCCATCATC CGCCGTCTGC TGGAGGATCG GGTGCGCGTC
AGGGCGCTGG TGCGGCCGGC TTCCCTGGCA TCCTGTTTCG AAGCAAAAGG GTTGACCTGG
ATCCATGGCG AACTGGGGGA CCGGGAGAGC CTGCGACGGC TGGTGGAGGG TGCCTCGGCC
GTTATCCACT GCGCCGGTTC CGTTCGCGGC GCCTGCCCGG CCGACTTTGA GCCGGCCAAT
GTCAGCGGAG TGGAGCGCAT CGTGGCGGCA GCCCGTGAGT CGGCCGGTCA TCCGCGGTTG
CTCCTGTTCT CATCCCTGGC CGCCAGGTCG CCCGAACTGT CCGACTATGC CGCCAGCAAG
CGGCGGGGCG AGGATGCCCT GCGCAGCGCT GCCCAGGGGC TTGACTGGAC GATCCTGCGA
CCGCCGGCGG TGTACGGTCC CGGAGACCGG GAGATGCTCC CCCTGCTGCA GTGGATGCGC
CGGGGAATCC TGTTCGTTCC GGGGAGCGGT GCGGGGCGCC TCTCGCTGAT CTACGTCAGC
GACCTTGCCG AAGCCGTCCT GTGCTGGCTC ATGAACGGCA GCGGCCTGAA CGGTTGCTTT
GAACCGCATG ACGGCAAGGC AGGCGGCTAC AGCTGGGAGG AGATCAGGGG GGTCGCCAGG
GAGCTTTACC GGCGCTCCGT CCTCCGCGTC GACATTCCGC GCCCGCTTCT GGAGCTGGCG
GCGCGCCTGA ACATCCCTGC ATCACGGTTC TTCGGCTATC GGCCGATGCT CACGCCGGGC
AAGGTCAGGG AGCTCTGCCA CCAGGACTGG GTCTGCCATG ATGAGGATTT TCGCCGGGCA
GTCAACTGGA GCCCCCGGGT GGGGCTGGCC GAGGGATTGC GGCGCACCCT GGGATGA
|
|---|
| Protein sequence | MGEPEGAVPL SPGLTVALTG GTGFVGGAII RRLLEDRVRV RALVRPASLA SCFEAKGLTW
IHGELGDRES LRRLVEGASA VIHCAGSVRG ACPADFEPAN VSGVERIVAA ARESAGHPRL
LLFSSLAARS PELSDYAASK RRGEDALRSA AQGLDWTILR PPAVYGPGDR EMLPLLQWMR
RGILFVPGSG AGRLSLIYVS DLAEAVLCWL MNGSGLNGCF EPHDGKAGGY SWEEIRGVAR
ELYRRSVLRV DIPRPLLELA ARLNIPASRF FGYRPMLTPG KVRELCHQDW VCHDEDFRRA
VNWSPRVGLA EGLRRTLG
|
|---|
| |