Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_2728 |
Symbol | |
ID | 4573457 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | - |
Start bp | 2981239 |
End bp | 2983815 |
Gene Length | 2577 bp |
Protein Length | 858 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639756782 |
Product | response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
Protein accession | YP_902386 |
Protein GI | 118581136 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGGGGG CGAACGAGAA AACGATGAAG ATACGTATTG TTGAGGATGA ACGTGCCCAT GCCGAGGCTA TCTCCCGTTC GTTCGGAGCC GCGCTTCCCG ATGCGAGGGT CAGCATTTGC GCCACGCTGG CCGAGTATCG GGCCGGCCTG GCGAGCGATC CTCCCGACAT CGTGCTGATC GATCTGAACC TGCCCGACGG CAGTGCCCTG GAGGCCCTGA CCTGTCCCGC GGAGGAGGGA GCCTTTCCCC TTCTGATCAT GACTGCCCAT GGCAACGAGG AGATGGCCGT GGCTGCCATG AAGGCCGGCG CCCTGGATTA CATCGTCAAA TCGGCCCAGG CCTTCGCATG CATGCCCCAA ACCGTTGAAC GGGCATTGCG CGAGTGGAAC CTGCTCCGGA AGCACCGCCA GGCCGAACTG TCCCTGTGCG AAAGCGAGAG CCGCTTCCGC CGAATCCTGC AGGAAATACC CTCCATCGCC TTCAAGGGCT ACGGTGTCGA CGGCACGGTG CGTTACTGGA ACCTGGCTTC CGAACTGTTC TACGGCTATA GCGCCGGGGA GGCCATCGGC CGCAACCTGC TGGACCTGGT CATCCCCGAG GGGATGCGCG CGGAGGAAAA ACGGCGCATG CTCCGCATGG CGGAAACGGG GCGGGCGGAT CCTCCCTCCG AGCAGTGTCT GCTGCGCAGG GATGGGTCGC GCATAACGGT GCTCTCATGT CATGCCGTTG TGCGCAGGCC GGGGGAAGCC CCTGAACTAT ACGGTTTGGA CATCGACATA AGCGAGCGCA AGATCAACGA AGAACAGCTG GAGTACCTGG CCACCCACGA CGAACTGACC GGGCTGGCCA ATCGGGCGCT TTTTCATGAC CGGCTTGAAC AGTCACTGCA CTATGCCAAA CGTTCCGGCC GCATCGTTGC CGTGCTGCTC TTGGACCTGG ACCGTTTCAA GATCATCAAC GACAGCCTCG GGCATTCCTT CGGCGACAGG CTGCTCAGCG CTGTTGCCCA GCGCCTGGAT CGGGTCGTGC GCGATACGGA TACCGTGGCC CGACTGGGAG GCGACGAGTT CGTCCTGCTC CTGGCGGAAG TGACCGAGCC CGACGACGTG GGGCTGCTTG CGTCCCGGAT TCTGCACGAA CTGGCGGTCC CCCACCGGAT AGAGGGGCGG GAGATCGTCA TGAGCGCCAG CCTGGGCATC AGCCTCTACC CCAAGGACAG CGGTGACGGC TCCACCCTGA TACGCAATGC CGATATAGCC ATGTACCGTG CCAAACAGGA AGGGGGAGGG GTTTTCTCGT TTTACGCGCC GGAGATGAAC CAGCGGGCCA TGGAAACCAT GGAGATCGAA AGCGCCCTGC GCCTGGCGCT GGAGCGGGGG GAATTCACCC TGTACTATCA GCCCAAGGTG GATCTGGCCA GCGGTCGCAT CAGCGGCTGC GAGGCCCTGA TCCGCTGGCT GCATCCCCGG CGGGGAGTGG TGGCGCCGGC CGACTTCATC CCCCTGGCCG AGGAGACCGG ACTGATCGTT CCCATCGGCA CCTGGGTGCT GAAGGAGGCC TGCCGTCAGG TTCGAGCATG GCAGGCCGAG GGGGTGCCCA TAGCGAACGT GGCGGTCAAC CTCTCGGCCC GGCAGTTCCG CACGGGGGAC CTGCCGGGGC TGGTGCGGGA GGTTCTCGGG GAAACCGGTC TCGACCCCCA TCTGCTGGAG CTGGAGATGA CCGAGAGCAT GGTCATGGCC GATCACGCCC AGGTCGTAGC GGTCATGGAG GAGCTGACGG CTATCGGTGT TCGCCTCAGT CTGGACGATT TCGGCACCGG CTACTCCAGT TTTGCCCACT TAAGCCACTT CCCCATCAAC CACCTGAAGA TCGACCGCTC CTTCATCAAA CAGATCGTTA CCGATCCCAA CTCCGCCACC ATCGCCACCT CCATCATCGC CATGGCGCAC CGCATGCGAC TGAAGGCCAT TGCCGAGGGG GTGGAGACCG AGGCCCAGCT GGCCTACCTG CGCAAACAGG GGTGCGACGA GATCCAGGGA TACCTGCTCA GCCGTCCGCT TCCGGCGTCG GAATATGCTG CTCTGGTGCG CCGGGATGCC GGCTTTTCCT GCCTTTCGGC GGCAGAGCAG GGGGGAGGGC GCACGCTGCT GATCGTCCAT GACGAGCCGC ACACCCTCGA CTCCCTGCAG CGGGCACTGG GCGGCGACGG CTACCGCATT CTCACCGCCA GCGATGCCTT CGAGGGGCTG GAACTGCTGG CAAGGGAGAA CGTACAGGTG GTGCTCTCCG ACCAGCGCAT GGCCAGGATC AGTGGCAGTG AGTTTTTCGA CCGGGTCAGG GTGCTGCACC CCGATACGGT CCGTGTGGTC ATCGCGGGCC AGGCCGAGCG GGAGGCGGAC AGCGACTCGC GGAATTGTGA TCAGCCCTAC AGCTTCCTGC TGGAGTCGTG GAGCGATGAG CTGCTGCGCG GCCAGATCCA GGATTCGTTC CGCTGGTACG AGACCAATCT CCGCTCCCCG CGGGAAGCCA CACTGGAATC TCCCCGCTGC CCCGCTGCCA GGGATGGAGC AGAATGA
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Protein sequence | MKGANEKTMK IRIVEDERAH AEAISRSFGA ALPDARVSIC ATLAEYRAGL ASDPPDIVLI DLNLPDGSAL EALTCPAEEG AFPLLIMTAH GNEEMAVAAM KAGALDYIVK SAQAFACMPQ TVERALREWN LLRKHRQAEL SLCESESRFR RILQEIPSIA FKGYGVDGTV RYWNLASELF YGYSAGEAIG RNLLDLVIPE GMRAEEKRRM LRMAETGRAD PPSEQCLLRR DGSRITVLSC HAVVRRPGEA PELYGLDIDI SERKINEEQL EYLATHDELT GLANRALFHD RLEQSLHYAK RSGRIVAVLL LDLDRFKIIN DSLGHSFGDR LLSAVAQRLD RVVRDTDTVA RLGGDEFVLL LAEVTEPDDV GLLASRILHE LAVPHRIEGR EIVMSASLGI SLYPKDSGDG STLIRNADIA MYRAKQEGGG VFSFYAPEMN QRAMETMEIE SALRLALERG EFTLYYQPKV DLASGRISGC EALIRWLHPR RGVVAPADFI PLAEETGLIV PIGTWVLKEA CRQVRAWQAE GVPIANVAVN LSARQFRTGD LPGLVREVLG ETGLDPHLLE LEMTESMVMA DHAQVVAVME ELTAIGVRLS LDDFGTGYSS FAHLSHFPIN HLKIDRSFIK QIVTDPNSAT IATSIIAMAH RMRLKAIAEG VETEAQLAYL RKQGCDEIQG YLLSRPLPAS EYAALVRRDA GFSCLSAAEQ GGGRTLLIVH DEPHTLDSLQ RALGGDGYRI LTASDAFEGL ELLARENVQV VLSDQRMARI SGSEFFDRVR VLHPDTVRVV IAGQAEREAD SDSRNCDQPY SFLLESWSDE LLRGQIQDSF RWYETNLRSP REATLESPRC PAARDGAE
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