Gene Ppro_2727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_2727 
Symbol 
ID4573456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand
Start bp2979445 
End bp2981175 
Gene Length1731 bp 
Protein Length576 aa 
Translation table11 
GC content61% 
IMG OID639756781 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_902385 
Protein GI118581135 
COG category[T] Signal transduction mechanisms 
COG ID[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGCTCG ATACCATCAC CATGCTGATA GCGCTGGGAG TACTTTGCTG CTCATTCGGC 
ATCGCCATGC TGCTGATCTG GCGCTTCTTC TCCCCCGGAC GGCCCATGCT GCTCTGGGCA
ATCGGCATGC TGAGCTGTGG CCTGGGAAGT TTTCTGGTCG GTCTCCGGGA TGTCATTCCG
CTCTTCTTCT CCCTGATCGT CGGCAACCTG CTGTTCGCCT TCTTCTTCTG CCTCATCTGG
TGGGGGACAT CGCTCCATCG CGGGAGCAAA GCGCCCCGCC TCGTCATCGC CGCGTCGCTG
CTCCTGTTCA GCGCGCTCTT TTCCTGGTTT GCCCTGGTGA GGCCGGATAT GGCATGGCGC
GTGGTCGTCA TGCGCTCCTT CATGGCGTTC TGGCTGACCG GCGCCATGTT CTCGCTGGTC
ACGGGGGGGA AACGATGTAC CGGCATGGAA AGGGTGGCGC TGGCCACATT GCTGCTCAAC
CTGCTGTTCC AGGTGCTGAC CGTCGCCATG CAGCTGTCGA GCATGTTCAG TCGTGAACCT
CTCCAGGGCA ACGCCAACGT GGCTTTCACC GCCCTGCTGT CGCTGGTGGG AGTTGCCGGC
TGGGGGCTGG CGGTGATCCT GGTGAAGCTG GAAAAGATGC TGGGAGAGCT GCGGGAGTCG
CGGGAACTCT TCGATATGAT TGCCAACAGC TCGCCGGCCA TGCTCTGGAT GTCCGGGCCA
GACGGCAAGT GTACCTGGTT CAACGAAACC TGGCTCTCCT TCACCGGCCG CCCCCTGGAG
CAGGAACTGG GCGATGGCTG GGCCGAGAGG GTTCACCCCG ATGATGCCGA CCGCTGTCTC
GGCACCTACC GGGAAGCCTT CGAGGCACGT CGTCCCTTTT CCATGGAATA CCGTCAGCTC
CACCACGGTG GCGACTATCG CTGGCTCCTG GACCAGGGGC ACCCACGCCA TGACGCCTCG
GGGGCTTTTT GTGGCTACAT CGGCTCCTGT CTGGACGTAC ATAATCGCTA CCTGGCTGAC
GAGATGCTCA GGTGCAAGAA CGACGAGATC GAACAGTTCA TCTACACGGT TTCCCATGAC
CTGCGCGGCC CGCTGGTGAC CATCAAGAGT TTTCTGGGGT ATCTGGAGCA GGACATGGAG
GCCGTTGATT CCAAGAGGAT CGGGCAGGAT CTGCATTTCA TCCATACCGC CGCCGACAAG
ATGGAAGAAC TGCTCGTGGA ACTTCTGGAA CTGTCGCGCA TCGGCCGGCG GGAGAATCCG
GCGCAGCGGA TGACGTTCCG GGAACTGGCC AGTGAGTCGT TGTCGCTGCT GGCGGGGCAC
ATCGTCGACC AGAGGGTGGG GGTGCGCGTG GCGGACGTGG ATCAGCCGTT GATGGGTGAT
CGGCCACGGC TGGTCCAGAT CTGGCAGAAC CTTTTGGACA ATGCCGTCAA GTACATGGGC
GACCAGCCGG CCCCCCTGAT CGAACTGGGC ATTGCGCGTC AGGAGGGAGA GGTTATCTTC
TTTGTCAGGG ATAACGGCAT CGGCATTGCT CCGGAGTATC AGGGTAGGGT ATTCGGCATG
TTCGACAAGC TGGATCAGCA GAGTGTCGGT GTTGGGTTGG GATTGGCCAT GGTCAAGCGG
ATCGTGGAAA AATACAACGG CAGGATCTGG GTGGATTCGC CGGGCAGGGG GAGCGGTTCA
TGCTTCAGCT TTACCCTGCC GGGAGCGCTC TTGCCTGAAG GAGAACAGTG A
 
Protein sequence
MLLDTITMLI ALGVLCCSFG IAMLLIWRFF SPGRPMLLWA IGMLSCGLGS FLVGLRDVIP 
LFFSLIVGNL LFAFFFCLIW WGTSLHRGSK APRLVIAASL LLFSALFSWF ALVRPDMAWR
VVVMRSFMAF WLTGAMFSLV TGGKRCTGME RVALATLLLN LLFQVLTVAM QLSSMFSREP
LQGNANVAFT ALLSLVGVAG WGLAVILVKL EKMLGELRES RELFDMIANS SPAMLWMSGP
DGKCTWFNET WLSFTGRPLE QELGDGWAER VHPDDADRCL GTYREAFEAR RPFSMEYRQL
HHGGDYRWLL DQGHPRHDAS GAFCGYIGSC LDVHNRYLAD EMLRCKNDEI EQFIYTVSHD
LRGPLVTIKS FLGYLEQDME AVDSKRIGQD LHFIHTAADK MEELLVELLE LSRIGRRENP
AQRMTFRELA SESLSLLAGH IVDQRVGVRV ADVDQPLMGD RPRLVQIWQN LLDNAVKYMG
DQPAPLIELG IARQEGEVIF FVRDNGIGIA PEYQGRVFGM FDKLDQQSVG VGLGLAMVKR
IVEKYNGRIW VDSPGRGSGS CFSFTLPGAL LPEGEQ