| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_2683 |
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| Symbol | |
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| ID | 4573807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | + |
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| Start bp | 2918943 |
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| End bp | 2920460 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639756740 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_902344 |
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| Protein GI | 118581094 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGGCCACAA AAGAGGGCGC CCCTGAGGTC AAGCCCGACA GACTCCTAGT GCTGACCATG
CTGATGGCTC TCGTTCTCAG CTTCGTCATT TCCCGGATTA TCTCCCGTCC CCTGGTTGAG
ATGGCCGATT TCGCCACCAG TGTCACCAGC CAGGAGCAGT ATCGGCACAT TTCGATCAAA
TCAGGGGACG AAATCGGCGC CCTGGCAGGC GCCCTGAACA GCATGGGCGA TCGCATCACG
TCCCAGATAC AGGAACTGGA ATCGGAAAAA AGCCGACTGG ACACCATCCT GAGGGGAATG
GGCGAAGGGG TCATGGTGGT GCTGACCAAC GGCACGATTA CCCTGGTCAA TCCCCCCTTC
CAGAGCCTCT TCTCCTTCAG GGGGGATGAG GAGGGAAAGA ATATCCGCGA GACCCTGAAT
ATTCCGGAGA TGATCGCCAC CTTTGACGAG GTGCGGGAAC AGGGAAAAGA GCTGGTCAGA
GAATTCCAGA TTCAGGATGC CGGCACCACC CTGCTGACCC ACTGGGTTCC CCTGAAGGTC
AATGAGGGGG ACGAAGGGGT CGTCGTAGTC TTCCATGACA TAACCGAGCG CAAGCATTAC
GAGGAAGCCC TGGCCAGGTC CGAAGATCGA TTCCGCAGCG TCGTGGAATG TTCCCTGACC
GGGATGCATT TCATCTCTCT CGAAGCAGAC GGCCGTCTGC TACTGACCGG AGCAAACCCA
GCGGCGGACA GCATCCTGGG GATCTCCCAT TGGCCCCTTG TGGGCAGTGA CGTGGAAGAA
GCTTTCCCCG AGTTGAAAGA CCATTTTCTG CTGGACCTCT ACCGCAGGGT AGCCGCCGGC
GAGCTCGGGC CCCAGTCCCT CGAACATGAA CGGAGACTTG AGAGCAAAAC CAAACATTAT
GACCTACGCG TCTTCCGCAC CGGTCCCGGC ACCATATCCG TGGAATTCGC CGATATCACC
GAACGCACGC GTATGCAGGA GGAGCTCCGC GAGGCTTCGG AGCGGGACCC GCTGACCTCA
CTGTACAACA GGAGAAAGTT GTATCAGCTA CTGACAGTGG AGTTGACGAG AACCAGGCGG
CACGGTCATC CCCTGACCCT GATGCTGCTG GATATCGATC ACTTCAAGAG GATCAACGAC
ACCTTCGGCC ACGACAGCGG CGATCTGGTT CTGACACAGG TGGCGGAGCT GATCTCGGCC
ATACTCAGGT CGACGGATAT CCTCGCCCGC TACGGCGGCG AGGAATTTGT GATCGCCTGT
CCGGAGACAG ACATGGATGG CGCTGCGGTG CTTGCGGAGA AGATTCGCTC TTCCATCGCG
ATGTTCAGCT TCCCAACGGT TGGAGCGGTT ACGATTAGTG TTGGGATTTC ACTGTTGGAG
AGCAAAGACG ACATCAACGC GCTGATCAAG CGCGCCGACA CAGCACTCTA TGCGGCCAAA
GAGATGGGCA GGAACAGGGT GGTGCGGTCA ACAGAGGACG GCTGCCCGAA TCCTTCTTCT
GACGCATGCA ATCCGTAA
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| Protein sequence | MATKEGAPEV KPDRLLVLTM LMALVLSFVI SRIISRPLVE MADFATSVTS QEQYRHISIK
SGDEIGALAG ALNSMGDRIT SQIQELESEK SRLDTILRGM GEGVMVVLTN GTITLVNPPF
QSLFSFRGDE EGKNIRETLN IPEMIATFDE VREQGKELVR EFQIQDAGTT LLTHWVPLKV
NEGDEGVVVV FHDITERKHY EEALARSEDR FRSVVECSLT GMHFISLEAD GRLLLTGANP
AADSILGISH WPLVGSDVEE AFPELKDHFL LDLYRRVAAG ELGPQSLEHE RRLESKTKHY
DLRVFRTGPG TISVEFADIT ERTRMQEELR EASERDPLTS LYNRRKLYQL LTVELTRTRR
HGHPLTLMLL DIDHFKRIND TFGHDSGDLV LTQVAELISA ILRSTDILAR YGGEEFVIAC
PETDMDGAAV LAEKIRSSIA MFSFPTVGAV TISVGISLLE SKDDINALIK RADTALYAAK
EMGRNRVVRS TEDGCPNPSS DACNP
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