Gene Ppro_2663 details

Gene Information

• Locus tag: Ppro_2663
• ID: 4574208
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter propionicus DSM 2379
• Kingdom: Bacteria
• Replicon accession: NC_008609
• Strand: +
• Start bp: 2898825
• End bp: 2899394
• Gene Length: 570 bp
• Protein Length: 189 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 639756719
• Product: ECF subfamily RNA polymerase sigma-24 factor
• Protein accession: YP_902324
• Protein GI: 118581074
• COG category: [K] Transcription
• COG ID: [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
• TIGRFAM ID: [TIGR02937] RNA polymerase sigma factor, sigma-70 family

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.0800237
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGGAACG TGGAGCACGA GATATCCGAC GAAAGCATAA TCAAGGCCGT ACGCGCCGGA 
GATGACACGG CTTTTGCCCA ACTGGTCGGC AGGCACAAGC GGCGGGTCTT CAGACTCGCC 
GCACGCTTTG CCAGAGACAG CGACGAGCAG GAGGACATCT GCCAAACTGT GTTCCTCAAG 
GTTTACGAAC ACCTGCCATC CTTCCGAAAT GACGCCCCTT TCGAGCACTG GTTGACCCGG 
ATTACCGTGC GCTGTTGCCA CGACGCACTT CGCGGCAGAC GGCATGAAAA AATCACCCTG 
CGCCTGGATG ACCAGGTATA TGATATTCGC GACAATGCCG AAAAGGCCCG CCATGAGGCG 
CGCCAGGCTC GCAACTTTCT CCGCTTCGCC CTTTCTCGAC TTACGGCGGA TGAACGACTC 
GTAATCACCC TACTGGAGTT GGAGGAATTT TCCGTACGGG AGATAGCAAC GGCCACCGGT 
TGGAGCGAAT CAAACGTTAA GGTAAGGGCG CACCGCGCTC GGCAGGCATT GAAACGGATA 
GTGGAGGAGC ATGATGACCA GCAGGCTTGA 

 

Protein sequence

MGNVEHEISD ESIIKAVRAG DDTAFAQLVG RHKRRVFRLA ARFARDSDEQ EDICQTVFLK 
VYEHLPSFRN DAPFEHWLTR ITVRCCHDAL RGRRHEKITL RLDDQVYDIR DNAEKARHEA 
RQARNFLRFA LSRLTADERL VITLLELEEF SVREIATATG WSESNVKVRA HRARQALKRI 
VEEHDDQQA