| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_2662 |
|---|
| Symbol | |
|---|
| ID | 4574207 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | + |
|---|
| Start bp | 2898329 |
|---|
| End bp | 2898817 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639756718 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_902323 |
|---|
| Protein GI | 118581073 |
|---|
| COG category | [N] Cell motility
[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3678] P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.117533 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGAA TTACAAAAAC CATCGCAGCC ATAGCCGCAG TCGTCACGAC CATCGGCCTG
GCCCCCCTCT CCGCATCAGC TTTCGGAGGA GCATGTCCTC CCCCCACGGG ACGGAACTAC
AACAAGATGG GGATGGAACT GGGTCTCTCC GACAAACAGA AACAGGATAT CCGGGAGATC
TGCACCAAGA GTCGCGCACA AAATGAACCG CTGATCAGAC AGATAGCCAC GGAGAGGCGC
GCACTGAGGA CATTGATACA CGCCGACAGC GTCGATGAGG CCGCCATCCG CGCCCAATCC
GGCAAAGTGG CAGCTATAAT GGCCAACTTG GCGGTACAGC ATGCCCAGAC AGGTCACCAG
GTTCGCGCTC TCCTGACACC GGAGCAAGCA CAGAAGTTCA AGGAGATTCA GGCAAAACGC
GACAGCAGGA TGGATGACAT GGGGAACTAT GGGGCACGAC ACCACGGTCA GCACAGGCAG
CACAGATAG
|
|---|
| Protein sequence | MKRITKTIAA IAAVVTTIGL APLSASAFGG ACPPPTGRNY NKMGMELGLS DKQKQDIREI
CTKSRAQNEP LIRQIATERR ALRTLIHADS VDEAAIRAQS GKVAAIMANL AVQHAQTGHQ
VRALLTPEQA QKFKEIQAKR DSRMDDMGNY GARHHGQHRQ HR
|
|---|
| |