Gene Ppro_2613 details

Gene Information

• Locus tag: Ppro_2613
• ID: 4574756
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter propionicus DSM 2379
• Kingdom: Bacteria
• Replicon accession: NC_008609
• Strand: +
• Start bp: 2842674
• End bp: 2844551
• Gene Length: 1878 bp
• Protein Length: 625 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 639756663
• Product: ABC transporter, transmembrane region
• Protein accession: YP_902275
• Protein GI: 118581025
• COG category: [V] Defense mechanisms
• COG ID: [COG1132] ABC-type multidrug transport system, ATPase and permease components

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.200186
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCACCACG GCGGCATGTA CGCTGAAGAG ATCACCGGCA AGGCCTACGA CACCCGCATC 
CTGATGCGCT TCGGCCAGTA TGTGAGGCCC TATTCCCGCA CCATCGCCGT CGTGCTGGTG 
ACGCTGCCGC TGGTGGCTGC CTGTCGCCTG GCCCAACCCT GGCTCATCAA GCAGGCCATC 
GATAACCATA TCACCACCGG GCGCCTGGCA GGGCTGGAGG AGATCGCCCT CCTGTTCCTG 
GCGTTCCTCA TGGGGGAGGC GCTGTTCGCC TACCTGCAGG TCTATCTGTT GCAGTCCGTG 
GGACAACGGG TCATGTCAGA CATGCGGGCG GAGCTCTTCC GGCACGTCAC GGGGCTGCCG 
GTCTCCTGGT TCGACCGCAC CCCGGTGGGG AGCGCGGTCA CCCGCCTGAC CAGCGATGTG 
GAGGTGCTGG GGGAGATGTT CGCCTCGGGG CTGATCACCA TCGTGGGAGA CATCCTGCTT 
TTGATCGGCA TCGTCTCGAT CATGCTCTGG ATGGATCCGC GGCTGTCACT GGCGACCTTT 
TCGGTGCTGC CTCCGCTCCT CTGCCTGACC TGGCTCTTCC GCCGCCGCAT GCGCCAGTCC 
TTCCGCGAGG TGCGCGCCCG CCTGGGCAGG CTGAACGCCT TTCTGGCCGA GAGTATCGGC 
GGCATGGCCA TCATCCAGGC GTTCAACCGG CAAAATGACG AGCAGCGCCG CTTCAACGAG 
CTGAACGCTT CCTACCGGGA CGCCAACATG CCGGTCATCC TGTGGGACGC CTCGCTCTAC 
GCCATCGTGG AGGCGCTCTC CTCCGTTGCC GGCGCCCTGA TCATCTGGTA CGGCGGCGGC 
CGAATCCTGG CCGGCGCCCT GACCTTCGGC GTACTGGTTG CCTTTCTCCA GTACATACAG 
AAGTTTTTCG GCCCCATCCG CGACCTGTCG GCCAAGTACT CGGTCATGCA GGGGGCCATG 
GCCGCCCTGG AGCGCATCTT CGCCCTGCTG GATACGGAAG ATGTCCAGGG TTCGAGATTC 
GAGGTTCGAG GTTCGAAGGT TGCCCCCCTA CCCCCCAACC ACGAACCACG AACCGCCCCT 
CTCGAACCGG CAACCGCGCA CCGTGAGCAA CGCCCCCCCC TGATCGAACT GCGCCACGTT 
TGCTTCAGCT ACCGTGAGGG GGAAAAGGTG CTGGATGATT TCAGCCTGAC CGTGCGGCGC 
GGGGAGCGGG TGGCCCTGGT GGGGGAGAGC GGCGGCGGCA AGACCACCAT CACCCGCCTT 
TTGACCCGCT TTTACGAGAT TCAGCAGGGG GCCATCCTGA TCGACGGCAG AGATATCGGC 
ACCCTGGAGG TGGCGGAACT GCGCCGCCGC ATCGGCATCG TCCTGCAGGA CCCCTGCCTG 
TTCAGCGGGA GCATCGAATT CAACATCCAC CTGGGGGACG AACAAGCCAG GCAGCGGGTA 
CGCCAGGCAG CGGCCGGCGT GGGGGCCGAC CGCTTCATCG AGCGTTTGCT TGCCGGCTAC 
GGGGAAGAGG TGCGGGAGCG GGGCAACAAC TTTTCCGTGG GCGAAAAACA GCTGATCTCC 
TTTGCCCGCG CCCTGGCCTT CGACCCGGAG ATTCTGGTGC TGGACGAGGC TACGGCAAGC 
GTTGACTCCG CCGCGGAGCG GATGATCCAG GAGGGAATCA GGGGGCTGAT GCGGGGACGT 
ACCTCCCTGA TCATCGCCCA CCGCCTCTCA ACTATCCGGG ATGCCGACCG TATCGTTGTC 
GTCCAGCATG GGCGCACGGT GGAAGAGGGC ACCCACCAGC AGCTGATGGA GCGGCGTGGG 
GTCTACCACC GCCTGCACCA GTTGCAATTC AGCGAGACCA CAGCGACACA TACCACCAGA 
GCGGAGCAGA CACCATGA 

 

Protein sequence

MHHGGMYAEE ITGKAYDTRI LMRFGQYVRP YSRTIAVVLV TLPLVAACRL AQPWLIKQAI 
DNHITTGRLA GLEEIALLFL AFLMGEALFA YLQVYLLQSV GQRVMSDMRA ELFRHVTGLP 
VSWFDRTPVG SAVTRLTSDV EVLGEMFASG LITIVGDILL LIGIVSIMLW MDPRLSLATF 
SVLPPLLCLT WLFRRRMRQS FREVRARLGR LNAFLAESIG GMAIIQAFNR QNDEQRRFNE 
LNASYRDANM PVILWDASLY AIVEALSSVA GALIIWYGGG RILAGALTFG VLVAFLQYIQ 
KFFGPIRDLS AKYSVMQGAM AALERIFALL DTEDVQGSRF EVRGSKVAPL PPNHEPRTAP 
LEPATAHREQ RPPLIELRHV CFSYREGEKV LDDFSLTVRR GERVALVGES GGGKTTITRL 
LTRFYEIQQG AILIDGRDIG TLEVAELRRR IGIVLQDPCL FSGSIEFNIH LGDEQARQRV 
RQAAAGVGAD RFIERLLAGY GEEVRERGNN FSVGEKQLIS FARALAFDPE ILVLDEATAS 
VDSAAERMIQ EGIRGLMRGR TSLIIAHRLS TIRDADRIVV VQHGRTVEEG THQQLMERRG 
VYHRLHQLQF SETTATHTTR AEQTP