Gene Ppro_2611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_2611 
Symbol 
ID4574754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand
Start bp2836797 
End bp2840201 
Gene Length3405 bp 
Protein Length1134 aa 
Translation table11 
GC content60% 
IMG OID639756661 
ProductPAS/PAC sensor hybrid histidine kinase 
Protein accessionYP_902273 
Protein GI118581023 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.413442 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGAAAC AGCCACCAGG TTACATCCCG CACATGGATG ACAAACTCTC TGCCGCGCTC 
CTGCATTCAA TCAAGGGCAT AGCCTGGGAG TGCGATCCAC TCACCCTGCG TTTCTCCCAT
GTTGACCAGG AGGCGGAATC CATCCTGGGC TATCCGTGCC GGCAGTGGGT CGAAGAACAG
GATTTCTGGC AGGCCCACAT CCCAACCGAT GACGCGGAGC AATGCGCCAT CCAGCTCAGG
GAGGCGGCTG AGAAGGGGGA AAGCCGGGAA TTCGAACACC GCATGGCCGC GGCGGACGGG
AGAACCGTCT GGTTCCGCAC CATTGTCACT CCGCTCCCCA CCGAAGGCGG CTCCATCCGC
CTGCAGGGGG TCATGATCGA CATCTCCGAG AGCAGGCAAA CCAGGATGCT GCTGCAATCC
AGTGAGGAGC GCTTCCAGCG GGCCATGCTG GGCGCCAACG ACGGCATCTG GGACTGGAAC
CTGCTCACCG ATGAGGTCTA CTTCTCCCCC CGCTGGAAGG AGATGCTCGG CTACGCTGAG
CATGAGCTGG AGAACAATCT CGACAGCTGG TCCTACCTGA CGCATCCGGC CGACCTGCAG
GCCACCCTGA CACTGATAAA GGACTACGTG GAGGGGCGGA GCGACACGTT TGAAGCCGAG
TTCCGCATGA GACACCGGGA CGGCCACTAC ATCTGCGTCC TGTCGCGCGG CCTCCTGGCT
CGTGACGATG ACGGCAGGGG AACCCGCCTA GTGGGTACCC ATGTGGACAT TACACGACAG
AGGCGGGCGG AGGAGGAACT TTATCTTGCC CGATACTGCC TGGATCAGGC GCCCATGGGT
ATTTTCAGAC TCGATCAGGA CATGAACGTA CTCTATGCCA ACAGGCATGC CTGCGAGAGT
CTGGGGTATT CCCGGGAAGA GCTCTGCCGG ATGTCGGTGT TCGACTTCGA CCCGCAGTTC
AGGAGGGAAG ACCTTCCCAA TCATCTAAAA AAAAGACAAC AACGGCATTG CATGACCTTT
GAAGCGGTTC ACCGGAACAG GGATGGTGTC ATCTTTCCCG TGGAAATAAC CTCAACCCAC
TTGGAATATC AGGGAGAAGA GTTCCTGTTC AGTTTCGCAC GTGACATTAC TGAGCGCAAA
AGGGCCGAGC AGGCCTTAAA GGAGCAGGAG GAGCTGTACA GCGTTATATT CAATCAGGCG
CCCGACGGTG TGGTCCTGGT GGACGCGGAG ACGCTGGAAT TCAGGGAGTT CAACGACACG
GCCTGCGCAG GGCTCGGCTA CAGCCGGGAG GAATTCGCCC GACTGTCCGT AGCCGATATC
AACCCCGAAT ACGACAAGGA GTGGCACCGG AGCCATATCA ACGAGATCAT CTCCCGGAAT
TATGGCGTCT TCGAGACCAT CCATCGTCAC CGCAACGGCT CGCTGCGCAA CATGCGCATC
AGCGTGAGAA CGGTCCAGAT TCGGGGGTGC CGCTATCTGC TGTCGTTCTG GACCGACACC
ACCGAGCAGG CCAGACTCCA GGAGGAGCTG AGACTGCGGG AATACTACCA GCGTGCGCTC
CTGGACAACT TTCCCTCTGC CGCCTGGATC AAGGACAGAG AGGGACGCTT CCTGGCGGTC
AACAGACAGC TTGCCACCTT TCTGGGGCTA GCGTCCCCCC AGGAACTGGT GGATAAAACC
ATCCATGATG TCGCCCCCTC GGCTCTTGCC GACCAAAACA CGGCAGAGGA CCGCAGGGTA
CTGACGAGCG GCAGACCAAA ACACGACGAG GAAGAGCTTC CGGTAAGCGG TGAAAACCGC
TGGTTCGAGG TCTATATTTC CCCGGTCTCC ATCGACGGCC AGGTCGTCGG TACCGTGGGA
TGCAACTGGG ATGTCACCGA GCGGAAAAAG ATCGAGCAAA ACCTCAGGGA GAGCGAGGAA
CGCTACCGCA GGCTGGTGGA GCTTTCTCCC GACGCGATCT TCATCCACAG CGGCAACAGA
TTCGTTTTCA TGAACCAGGC CGCCGCCAGG CTGCTGGGAG CGAAAACCCC GGAAGAGCTC
TACGGCAGGA AACCGCTGGA TTTCATCCAT CCCGACCAGC GGGAAATGGT GGGGCAGCGG
ATAGACAGGG CACTTGAACG TCGGGACAAC CCTCCCATCG AGGAGCTGAT GGTCCGACTG
GACGGCTCCA CCGTGCCGGT GGAGATGGTC TCCGTGCATC ACACCTACCG GGGCAAAGAC
GCGGTGCTGG CCATAGCCCG CGACATAAGC GAGCGAATGA AGATTCAGGA CGAGCGGGTA
CGAAGCCAGA AACTGGAATC CCTGGGGCTC CTGGCAGGAG GCATCGCCCA TGATTTCAAC
AACATCCTTT CCGGCATCCT GGGAAACATC TCGCTGGTCT GCTCAAGACT CGACCCCGAC
GACCCTCTCG CCAGCCGCCT CAAAAGCTGC GAAAAAGCGA CCATCCGGGC CACCGGGCTG
ACCCGGCAGC TGCTCACCTT CGCCCGCGGC GGAGAACCGG TCAGGAAGGT CATCGATCCC
GCCCCCCTGA TCCGGGAAAG CGCCACCTTC GTGCTGCGCG GCACCAACGT GAAGGGTGAC
ATCCGGATGA CGGAAGGCCT CTCGTGCATC AACGTCGATG CCGGACAGAT CAGTCAGGTG
CTGAACAACC TGATCATCAA CGCCACGCAC TCCATGCCGG GTGGCGGGGT AATCATCATC
AGCGCGATGA ACGAAGCGCT TCACGAGGGG AATGCGTTCA ACCTGGCACC AGGGGATTAC
CTGAGAATAA CCGTCCAGGA CCAGGGCTGC GGCATCCCGC CGGAAAATCT GCCCAAGATA
TTCGACCCCT ACTTCACCAC CAAACGAAGG GGGAGCGGCC TGGGGCTTGC TTCGGCCTAT
GCCATAATCA GACGCCATGG CGGGGCGATC GAAGTATCCT CCCGGGTGGG GGTTGGAACG
ACGTTCACCC TCCGCCTTCC GGCTCAGCCC CAGGTACATG CCGCTGACAG GATGGTTGGA
CCAGGGAATG TCCTGTGTGG AAGCGGAAGA ATCCTGGTCA TGGACGACGA AGAGATCATC
CGGGAGGTAT CACGGGAAAT CCTCCAGTGC GCCGGTTACT GCGTGGAGTC GTGCTCCGAC
GGAAGAGAGG CACTGCAGCG CTTCCAGGAG GCGAAAGAGA AAAGCAGACC GTTCGATGCG
ATCATCATGG ACCTGACCAT TCCCGGCGGC ATGGGGGGGA AGGAGGCAGC ACAGCTCATC
CGCGCTGTGG ACCCGAACGC GGTCCTGATC GTCTCCAGCG GCTATTCCAA CGACCCGGTG
ATTGCCACCT ACCAACAGCA CGGCTTCAAC GGATCGGTGG TCAAGCCGTT CTCCTTCCAA
TCCCTGGCCG GCGAGGTGCA ACGGTTGATC AATAAGGGGA AGTAA
 
Protein sequence
MRKQPPGYIP HMDDKLSAAL LHSIKGIAWE CDPLTLRFSH VDQEAESILG YPCRQWVEEQ 
DFWQAHIPTD DAEQCAIQLR EAAEKGESRE FEHRMAAADG RTVWFRTIVT PLPTEGGSIR
LQGVMIDISE SRQTRMLLQS SEERFQRAML GANDGIWDWN LLTDEVYFSP RWKEMLGYAE
HELENNLDSW SYLTHPADLQ ATLTLIKDYV EGRSDTFEAE FRMRHRDGHY ICVLSRGLLA
RDDDGRGTRL VGTHVDITRQ RRAEEELYLA RYCLDQAPMG IFRLDQDMNV LYANRHACES
LGYSREELCR MSVFDFDPQF RREDLPNHLK KRQQRHCMTF EAVHRNRDGV IFPVEITSTH
LEYQGEEFLF SFARDITERK RAEQALKEQE ELYSVIFNQA PDGVVLVDAE TLEFREFNDT
ACAGLGYSRE EFARLSVADI NPEYDKEWHR SHINEIISRN YGVFETIHRH RNGSLRNMRI
SVRTVQIRGC RYLLSFWTDT TEQARLQEEL RLREYYQRAL LDNFPSAAWI KDREGRFLAV
NRQLATFLGL ASPQELVDKT IHDVAPSALA DQNTAEDRRV LTSGRPKHDE EELPVSGENR
WFEVYISPVS IDGQVVGTVG CNWDVTERKK IEQNLRESEE RYRRLVELSP DAIFIHSGNR
FVFMNQAAAR LLGAKTPEEL YGRKPLDFIH PDQREMVGQR IDRALERRDN PPIEELMVRL
DGSTVPVEMV SVHHTYRGKD AVLAIARDIS ERMKIQDERV RSQKLESLGL LAGGIAHDFN
NILSGILGNI SLVCSRLDPD DPLASRLKSC EKATIRATGL TRQLLTFARG GEPVRKVIDP
APLIRESATF VLRGTNVKGD IRMTEGLSCI NVDAGQISQV LNNLIINATH SMPGGGVIII
SAMNEALHEG NAFNLAPGDY LRITVQDQGC GIPPENLPKI FDPYFTTKRR GSGLGLASAY
AIIRRHGGAI EVSSRVGVGT TFTLRLPAQP QVHAADRMVG PGNVLCGSGR ILVMDDEEII
REVSREILQC AGYCVESCSD GREALQRFQE AKEKSRPFDA IIMDLTIPGG MGGKEAAQLI
RAVDPNAVLI VSSGYSNDPV IATYQQHGFN GSVVKPFSFQ SLAGEVQRLI NKGK