Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_2611 |
Symbol | |
ID | 4574754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | + |
Start bp | 2836797 |
End bp | 2840201 |
Gene Length | 3405 bp |
Protein Length | 1134 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639756661 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_902273 |
Protein GI | 118581023 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.413442 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGAAAC AGCCACCAGG TTACATCCCG CACATGGATG ACAAACTCTC TGCCGCGCTC CTGCATTCAA TCAAGGGCAT AGCCTGGGAG TGCGATCCAC TCACCCTGCG TTTCTCCCAT GTTGACCAGG AGGCGGAATC CATCCTGGGC TATCCGTGCC GGCAGTGGGT CGAAGAACAG GATTTCTGGC AGGCCCACAT CCCAACCGAT GACGCGGAGC AATGCGCCAT CCAGCTCAGG GAGGCGGCTG AGAAGGGGGA AAGCCGGGAA TTCGAACACC GCATGGCCGC GGCGGACGGG AGAACCGTCT GGTTCCGCAC CATTGTCACT CCGCTCCCCA CCGAAGGCGG CTCCATCCGC CTGCAGGGGG TCATGATCGA CATCTCCGAG AGCAGGCAAA CCAGGATGCT GCTGCAATCC AGTGAGGAGC GCTTCCAGCG GGCCATGCTG GGCGCCAACG ACGGCATCTG GGACTGGAAC CTGCTCACCG ATGAGGTCTA CTTCTCCCCC CGCTGGAAGG AGATGCTCGG CTACGCTGAG CATGAGCTGG AGAACAATCT CGACAGCTGG TCCTACCTGA CGCATCCGGC CGACCTGCAG GCCACCCTGA CACTGATAAA GGACTACGTG GAGGGGCGGA GCGACACGTT TGAAGCCGAG TTCCGCATGA GACACCGGGA CGGCCACTAC ATCTGCGTCC TGTCGCGCGG CCTCCTGGCT CGTGACGATG ACGGCAGGGG AACCCGCCTA GTGGGTACCC ATGTGGACAT TACACGACAG AGGCGGGCGG AGGAGGAACT TTATCTTGCC CGATACTGCC TGGATCAGGC GCCCATGGGT ATTTTCAGAC TCGATCAGGA CATGAACGTA CTCTATGCCA ACAGGCATGC CTGCGAGAGT CTGGGGTATT CCCGGGAAGA GCTCTGCCGG ATGTCGGTGT TCGACTTCGA CCCGCAGTTC AGGAGGGAAG ACCTTCCCAA TCATCTAAAA AAAAGACAAC AACGGCATTG CATGACCTTT GAAGCGGTTC ACCGGAACAG GGATGGTGTC ATCTTTCCCG TGGAAATAAC CTCAACCCAC TTGGAATATC AGGGAGAAGA GTTCCTGTTC AGTTTCGCAC GTGACATTAC TGAGCGCAAA AGGGCCGAGC AGGCCTTAAA GGAGCAGGAG GAGCTGTACA GCGTTATATT CAATCAGGCG CCCGACGGTG TGGTCCTGGT GGACGCGGAG ACGCTGGAAT TCAGGGAGTT CAACGACACG GCCTGCGCAG GGCTCGGCTA CAGCCGGGAG GAATTCGCCC GACTGTCCGT AGCCGATATC AACCCCGAAT ACGACAAGGA GTGGCACCGG AGCCATATCA ACGAGATCAT CTCCCGGAAT TATGGCGTCT TCGAGACCAT CCATCGTCAC CGCAACGGCT CGCTGCGCAA CATGCGCATC AGCGTGAGAA CGGTCCAGAT TCGGGGGTGC CGCTATCTGC TGTCGTTCTG GACCGACACC ACCGAGCAGG CCAGACTCCA GGAGGAGCTG AGACTGCGGG AATACTACCA GCGTGCGCTC CTGGACAACT TTCCCTCTGC CGCCTGGATC AAGGACAGAG AGGGACGCTT CCTGGCGGTC AACAGACAGC TTGCCACCTT TCTGGGGCTA GCGTCCCCCC AGGAACTGGT GGATAAAACC ATCCATGATG TCGCCCCCTC GGCTCTTGCC GACCAAAACA CGGCAGAGGA CCGCAGGGTA CTGACGAGCG GCAGACCAAA ACACGACGAG GAAGAGCTTC CGGTAAGCGG TGAAAACCGC TGGTTCGAGG TCTATATTTC CCCGGTCTCC ATCGACGGCC AGGTCGTCGG TACCGTGGGA TGCAACTGGG ATGTCACCGA GCGGAAAAAG ATCGAGCAAA ACCTCAGGGA GAGCGAGGAA CGCTACCGCA GGCTGGTGGA GCTTTCTCCC GACGCGATCT TCATCCACAG CGGCAACAGA TTCGTTTTCA TGAACCAGGC CGCCGCCAGG CTGCTGGGAG CGAAAACCCC GGAAGAGCTC TACGGCAGGA AACCGCTGGA TTTCATCCAT CCCGACCAGC GGGAAATGGT GGGGCAGCGG ATAGACAGGG CACTTGAACG TCGGGACAAC CCTCCCATCG AGGAGCTGAT GGTCCGACTG GACGGCTCCA CCGTGCCGGT GGAGATGGTC TCCGTGCATC ACACCTACCG GGGCAAAGAC GCGGTGCTGG CCATAGCCCG CGACATAAGC GAGCGAATGA AGATTCAGGA CGAGCGGGTA CGAAGCCAGA AACTGGAATC CCTGGGGCTC CTGGCAGGAG GCATCGCCCA TGATTTCAAC AACATCCTTT CCGGCATCCT GGGAAACATC TCGCTGGTCT GCTCAAGACT CGACCCCGAC GACCCTCTCG CCAGCCGCCT CAAAAGCTGC GAAAAAGCGA CCATCCGGGC CACCGGGCTG ACCCGGCAGC TGCTCACCTT CGCCCGCGGC GGAGAACCGG TCAGGAAGGT CATCGATCCC GCCCCCCTGA TCCGGGAAAG CGCCACCTTC GTGCTGCGCG GCACCAACGT GAAGGGTGAC ATCCGGATGA CGGAAGGCCT CTCGTGCATC AACGTCGATG CCGGACAGAT CAGTCAGGTG CTGAACAACC TGATCATCAA CGCCACGCAC TCCATGCCGG GTGGCGGGGT AATCATCATC AGCGCGATGA ACGAAGCGCT TCACGAGGGG AATGCGTTCA ACCTGGCACC AGGGGATTAC CTGAGAATAA CCGTCCAGGA CCAGGGCTGC GGCATCCCGC CGGAAAATCT GCCCAAGATA TTCGACCCCT ACTTCACCAC CAAACGAAGG GGGAGCGGCC TGGGGCTTGC TTCGGCCTAT GCCATAATCA GACGCCATGG CGGGGCGATC GAAGTATCCT CCCGGGTGGG GGTTGGAACG ACGTTCACCC TCCGCCTTCC GGCTCAGCCC CAGGTACATG CCGCTGACAG GATGGTTGGA CCAGGGAATG TCCTGTGTGG AAGCGGAAGA ATCCTGGTCA TGGACGACGA AGAGATCATC CGGGAGGTAT CACGGGAAAT CCTCCAGTGC GCCGGTTACT GCGTGGAGTC GTGCTCCGAC GGAAGAGAGG CACTGCAGCG CTTCCAGGAG GCGAAAGAGA AAAGCAGACC GTTCGATGCG ATCATCATGG ACCTGACCAT TCCCGGCGGC ATGGGGGGGA AGGAGGCAGC ACAGCTCATC CGCGCTGTGG ACCCGAACGC GGTCCTGATC GTCTCCAGCG GCTATTCCAA CGACCCGGTG ATTGCCACCT ACCAACAGCA CGGCTTCAAC GGATCGGTGG TCAAGCCGTT CTCCTTCCAA TCCCTGGCCG GCGAGGTGCA ACGGTTGATC AATAAGGGGA AGTAA
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Protein sequence | MRKQPPGYIP HMDDKLSAAL LHSIKGIAWE CDPLTLRFSH VDQEAESILG YPCRQWVEEQ DFWQAHIPTD DAEQCAIQLR EAAEKGESRE FEHRMAAADG RTVWFRTIVT PLPTEGGSIR LQGVMIDISE SRQTRMLLQS SEERFQRAML GANDGIWDWN LLTDEVYFSP RWKEMLGYAE HELENNLDSW SYLTHPADLQ ATLTLIKDYV EGRSDTFEAE FRMRHRDGHY ICVLSRGLLA RDDDGRGTRL VGTHVDITRQ RRAEEELYLA RYCLDQAPMG IFRLDQDMNV LYANRHACES LGYSREELCR MSVFDFDPQF RREDLPNHLK KRQQRHCMTF EAVHRNRDGV IFPVEITSTH LEYQGEEFLF SFARDITERK RAEQALKEQE ELYSVIFNQA PDGVVLVDAE TLEFREFNDT ACAGLGYSRE EFARLSVADI NPEYDKEWHR SHINEIISRN YGVFETIHRH RNGSLRNMRI SVRTVQIRGC RYLLSFWTDT TEQARLQEEL RLREYYQRAL LDNFPSAAWI KDREGRFLAV NRQLATFLGL ASPQELVDKT IHDVAPSALA DQNTAEDRRV LTSGRPKHDE EELPVSGENR WFEVYISPVS IDGQVVGTVG CNWDVTERKK IEQNLRESEE RYRRLVELSP DAIFIHSGNR FVFMNQAAAR LLGAKTPEEL YGRKPLDFIH PDQREMVGQR IDRALERRDN PPIEELMVRL DGSTVPVEMV SVHHTYRGKD AVLAIARDIS ERMKIQDERV RSQKLESLGL LAGGIAHDFN NILSGILGNI SLVCSRLDPD DPLASRLKSC EKATIRATGL TRQLLTFARG GEPVRKVIDP APLIRESATF VLRGTNVKGD IRMTEGLSCI NVDAGQISQV LNNLIINATH SMPGGGVIII SAMNEALHEG NAFNLAPGDY LRITVQDQGC GIPPENLPKI FDPYFTTKRR GSGLGLASAY AIIRRHGGAI EVSSRVGVGT TFTLRLPAQP QVHAADRMVG PGNVLCGSGR ILVMDDEEII REVSREILQC AGYCVESCSD GREALQRFQE AKEKSRPFDA IIMDLTIPGG MGGKEAAQLI RAVDPNAVLI VSSGYSNDPV IATYQQHGFN GSVVKPFSFQ SLAGEVQRLI NKGK
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