| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_2606 |
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| Symbol | |
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| ID | 4572939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | + |
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| Start bp | 2831233 |
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| End bp | 2833140 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639756656 |
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| Product | arginine decarboxylase |
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| Protein accession | YP_902268 |
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| Protein GI | 118581018 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1166] Arginine decarboxylase (spermidine biosynthesis) |
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| TIGRFAM ID | [TIGR01273] arginine decarboxylase, biosynthetic |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.455337 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGCGCT GGTCAATCAA CGATTCCGCG AAAATTTACA ATCTCAACAA CTGGGGCGGT
GATCTCTTCT CCATCAACAA GAAGGGTAAT ATCTGCGTCC ATCCTTCCCC CAATTCAAAG
TATTCCATCG AACTGGCATC CCTGGTGGAC GACCTGATCA AGCGTAAGAT AAAACCCCCC
ATCCTGCTCA GGTTCATGAA CATCCTGGAG GGGCGCATCG CATCCATCAA CCGGGTCTTC
AGGAATGCCA TCCAGACCAA CAACTACCCG GCCCAGTACC AGACCTTCTA CCCCATCAAG
GTCAACCAGC AGCGCCAGGT CGTGGAGGCC ATCGCCAACT TCGGCAAGAA GTACAACATC
GGCCTGGAGG TGGGCTCCAA GCCTGAACTT GTGGCCGCCA TTTCCATATC CACCAACAAC
AGCCTGCCGA TCATCTGCAA CGGCTACAAG GATACCGAGT TCATCGAGAC CGTCCTGTAC
GCCACCAAGA TCGGTTACAA TATCACCATC GTGATCGAGA AGCTGTTCGA ACTGGAGAAG
GTCATCGAAC TCTCCAGGAA GACCGGCATC ACCCCCAAAC TGGGCATCAG GGTCAAGCTC
TCCTCCAAGG GGACCGGCAA GTGGGCCACC TCCGGCGGCG AGGACGCCAA GTTCGGCCTG
CGCATCTCCG AGATAATCAC CGCCATCGAC CTGCTCAAGC AGTACAACCT GATCGACAGC
GTCAAGCTGC TGCACTCCCA CATCGGCAGC CAGGTCACCA AGATCGACAA GATCAAAAAC
GCGCTGATCG AGGGGGCCCG CATCTATGTG GAGATGAAGA AGCTGGGGGT CAACCTGGAG
TACATCGACA TCGGCGGCGG TCTGGGGGTG GACTACGACG GATCCAAGTC CAGCTACTTC
TCCAGCGTCA ACTACTCGGT GGAAGAGTAC GCCAACGACG TCATCTACCA GATCAAGAAC
ATCTGCGACG AGGCGGGGGT GGACTGCCCC AACATCATCT CCGAATCGGG CCGGGCCACC
GTTGCCCACT ACTCGGTGAT GGTCACCAAC ATCCTCAACA CCAACACCCA GAACCAGATG
CCCGACTTCG AATCCATCCT GACCCAGGCG GAGCCCCTCT CACCCACGGT CAGGAAGCTT
GTGGACATCT ACAAGAGCAT CGACCGCCAC TCCCTGCGCG AGGATTACCA CGACACCCTC
CAGCTGATCC AGGAGGCGGT CAGCCTGTTC AACCTGGGCT ACCTGAACCT GAACGACCGG
GCCATGGCGG AATGGCTGTA CACACGAATA ATCAAGAAGA TCAACAACCT GGTGGAAAAG
ATGAAGCCGG TCCCCGAGGA GTTGCAGAAC TTCAAGCTGA GCATGCGCCA GACCTATTTC
GCCAACTTCT CCCTGTTCCA GTCCATACCG GATTCCTGGG CCATCGACCA GCTCTTCCCG
ATCATGCCGA TCCAGCGGCT GGGGGAAAAG CCGGACGTGA TCGCCTCCAT CGCCGACATC
ACCTGCGATT CCGACGGCGA GATCACCAGC TTCGTGGGCG AGAACGGACG GACCAAGTAC
CTGCCGCTGC ACAAGATCAG AAAGAACGAG GAGTACTACA TCGGCTTCTT CCTGATCGGC
GCCTACCAGG AGATACTAGG GGACCTGCAC AACCTGTTCG GTGACACCAA TGCCGTGCAC
ATAACCTTCA ACAAGAAGAC CAACTACCGC ATCGACACGG TCATCAGCGG CGACGCCATC
CAGCAGTCCC TCAAATACGT ACAGTACGAC GGCAACGAGA TACTGAAAAA AGTGCGCGAC
AGCCTGGAGA ACGGGGTCGC CTCCAAGAAG ATCTCCATCG AGGAGAGCAG CCACTTCCTG
GAACTGCTGG ACAAGACCAT CCAGGCCTAC ACCTACCTGG GTGAATAG
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| Protein sequence | MERWSINDSA KIYNLNNWGG DLFSINKKGN ICVHPSPNSK YSIELASLVD DLIKRKIKPP
ILLRFMNILE GRIASINRVF RNAIQTNNYP AQYQTFYPIK VNQQRQVVEA IANFGKKYNI
GLEVGSKPEL VAAISISTNN SLPIICNGYK DTEFIETVLY ATKIGYNITI VIEKLFELEK
VIELSRKTGI TPKLGIRVKL SSKGTGKWAT SGGEDAKFGL RISEIITAID LLKQYNLIDS
VKLLHSHIGS QVTKIDKIKN ALIEGARIYV EMKKLGVNLE YIDIGGGLGV DYDGSKSSYF
SSVNYSVEEY ANDVIYQIKN ICDEAGVDCP NIISESGRAT VAHYSVMVTN ILNTNTQNQM
PDFESILTQA EPLSPTVRKL VDIYKSIDRH SLREDYHDTL QLIQEAVSLF NLGYLNLNDR
AMAEWLYTRI IKKINNLVEK MKPVPEELQN FKLSMRQTYF ANFSLFQSIP DSWAIDQLFP
IMPIQRLGEK PDVIASIADI TCDSDGEITS FVGENGRTKY LPLHKIRKNE EYYIGFFLIG
AYQEILGDLH NLFGDTNAVH ITFNKKTNYR IDTVISGDAI QQSLKYVQYD GNEILKKVRD
SLENGVASKK ISIEESSHFL ELLDKTIQAY TYLGE
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