| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_2565 |
|---|
| Symbol | |
|---|
| ID | 4572393 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | + |
|---|
| Start bp | 2778336 |
|---|
| End bp | 2779139 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639756614 |
|---|
| Product | DNA/RNA non-specific endonuclease |
|---|
| Protein accession | YP_902227 |
|---|
| Protein GI | 118580977 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1864] DNA/RNA endonuclease G, NUC1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000000966984 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCAC CGACAAAGGC TCTGGCTCTG CTGGCGCTGC TCGTTTCACT GACCATTTCC
CCTGCTCTGG CTGGGCAGAC AAGCTGCCCC GAACACTTTG CGGATGGCGA GGCCCCGGAC
CTGATCAACC AGAAACTCGA CACAAAGACC CGTGAAGTAT GCTATTCCGG TTATGCCATC
AAACATTCCG GCATAACCAG GACGCCGCTG TACGCGGCCG AGCACCTGAC CCGCCAACGG
CTCACCCGGG GCAAGGGGCT GAAACGCCAC AACCGTTTCC ATGCCGATGA AAACATACCG
GAATCGGAAC GGGCCGAACT GCGCCACTAC GCCCGCTCCG GGTACGACCG CGGCCACGTG
GCCCCCTCGG CGGATATGTT CGACACGCAG TCCCAGTACG AGTGCTTTTC ACTGGCCAAC
ATGATGCCCC AGATTCCGGA GAACAACCGC GGCCCCTGGG AGGGGATCGA ATCCAGCGTG
AGGAAGATGG CGCGTGAACG GGGCGACCTG TATGTGGTCA CCGGCCCGAT CTTCCGGGGA
GAGCGGGTGC AGCGCATCGG CGGCGCGGTG CTGGTGCCTA GTAGCATGTT CAAGGCGGTC
TACGACCCCA CAAGGCAGGA GGCGGGCGCA TACCTGATCG ACAACAGCGC TGACAGCCAG
CCGCAAATCA TCTCCATAGC CGAGCTGGAG AAGGTGACCG GCATCAGCAT CTTTCCGGCC
TTGAAACGCA AGGTCAAGGC CACGCCCATG AACCTGGCCG AGGCCGAGTC GTACCGGGAG
CGTAAACAGA GGAGAGGAAT ATGA
|
|---|
| Protein sequence | MKAPTKALAL LALLVSLTIS PALAGQTSCP EHFADGEAPD LINQKLDTKT REVCYSGYAI
KHSGITRTPL YAAEHLTRQR LTRGKGLKRH NRFHADENIP ESERAELRHY ARSGYDRGHV
APSADMFDTQ SQYECFSLAN MMPQIPENNR GPWEGIESSV RKMARERGDL YVVTGPIFRG
ERVQRIGGAV LVPSSMFKAV YDPTRQEAGA YLIDNSADSQ PQIISIAELE KVTGISIFPA
LKRKVKATPM NLAEAESYRE RKQRRGI
|
|---|
| |