| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_2552 |
|---|
| Symbol | |
|---|
| ID | 4572450 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | + |
|---|
| Start bp | 2765476 |
|---|
| End bp | 2765946 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639756601 |
|---|
| Product | phosphodiesterase |
|---|
| Protein accession | YP_902214 |
|---|
| Protein GI | 118580964 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0622] Predicted phosphoesterase |
|---|
| TIGRFAM ID | [TIGR00040] phosphoesterase, MJ0936 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0760667 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATCT TGGTGACATC CGATAGCCAC GGTAACTACC CGCTCCTGTT CCGGGCCAGC
GACGCGGCCG CTCCCCTGGA TGCGGTCATC CACCTGGGTG ACGGAGGCGA AGACGCAGAG
TTGCTCAACC AGGCAACCGG TATCCAGGTC ATCGCCATAG CCGGCAACTG CGATTACCAT
CCCTCCGTGC CGCGGGAACT GCTCTGGGAG TGCGCCGGGA TCCGCTTCCT GCTGACCCAC
GGTGACCGCT ATGGCGTCAA GAGGGATCTG AACCTGCTGG AAAAGCGCGC GCTCCAATTG
GAAGCGAACG TGGTGCTGTA CGGCCACAGC CACCAAGCCG CCATCTCCAC TCGCTCGGAG
ATCCTGTTCG TCAATCCCGG CACCCTGATC AAGGGCACCA GCCGCACCAG CTATGCGACC
CTGGAAATCG GCCCCAACGG CCTGAAGCCG CTCCTGCACG ACATCAGTTG A
|
|---|
| Protein sequence | MKILVTSDSH GNYPLLFRAS DAAAPLDAVI HLGDGGEDAE LLNQATGIQV IAIAGNCDYH
PSVPRELLWE CAGIRFLLTH GDRYGVKRDL NLLEKRALQL EANVVLYGHS HQAAISTRSE
ILFVNPGTLI KGTSRTSYAT LEIGPNGLKP LLHDIS
|
|---|
| |