Gene Ppro_2521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_2521 
Symbol 
ID4572124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand- 
Start bp2732975 
End bp2733535 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content67% 
IMG OID639756570 
Product2'-5' RNA ligase 
Protein accessionYP_902183 
Protein GI118580933 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1514] 2'-5' RNA ligase 
TIGRFAM ID[TIGR02258] 2'-5' RNA ligase 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.00000915911 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCGCT TGTTCATTGC CATCGATCTG CCCGAAGTCG TGCGGCAGGA TCTCTGTCGT 
CTGAACGTGC CGATCCCCGG TAGCCGCTGG GTTCCCGCCG ATCAGCTGCA CCTGACCCTG 
GCATTCCTGG GGGATGTGGG GGAGGAGAGG GTGGCTGGCC TGGCCAGGGC GCTTGACCAG 
GTGAGCGCTG CTCCCTTCCG GTTGCGCTTC GACCGGCTGG GCTGCTTCCC CTCCCGTGCG 
CGGCCCCGGG TGCTCTGGGT GGGGCTGAAA CCGGAGCCGT TGCTCCTCTC CCTGGCGGAC 
CGGCTGCGTG AGTTCCTCCG CGACTGTTGC ATTCCCCAGG AAGAACGCCC CTTCTCGCCC 
CATATCACCC TGGCCCGACT CAAGCTGCCG GCGGCCCGGG AGTGTGCCTC CTTTCTGGAT 
CGGCCGTTGG CGCTGGAGCG GACATCGGTT TCCGCCCAGG AGTTCATCCT CTTCGAGAGC 
CTCTTGACTG CCGCAGGCGC CATACATACG CCGCTGAAAC GCTTTCCGCT CTCCGGCGGC 
AGTGGCGGCC CGCCAGCCTG A
 
Protein sequence
MPRLFIAIDL PEVVRQDLCR LNVPIPGSRW VPADQLHLTL AFLGDVGEER VAGLARALDQ 
VSAAPFRLRF DRLGCFPSRA RPRVLWVGLK PEPLLLSLAD RLREFLRDCC IPQEERPFSP 
HITLARLKLP AARECASFLD RPLALERTSV SAQEFILFES LLTAAGAIHT PLKRFPLSGG 
SGGPPA