| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_2498 |
|---|
| Symbol | |
|---|
| ID | 4573952 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | + |
|---|
| Start bp | 2706874 |
|---|
| End bp | 2709108 |
|---|
| Gene Length | 2235 bp |
|---|
| Protein Length | 744 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639756548 |
|---|
| Product | ribonucleotide-diphosphate reductase subunit alpha |
|---|
| Protein accession | YP_902161 |
|---|
| Protein GI | 118580911 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0184259 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGAG AAAAGACACA CCCGACACTG CCCGGTTTAT CGAAAAACGC ACTCACCGTA
CTGGAGAAAC GCTACCTCAG GCGTGGTCCG AACGGCACAA CGCTGGAGAC AGCGGCCGAC
ATGTTCCGCC GGGTGGCCGA TACCATCGCG GCGGCCGACC GCTCCTTCGA TGAAACGGCC
GATACCGCTG GCCTGGGCGA CACCTTCTAC CGCATGATGA CCAGCTTCGA GTTTCTGCCC
AACTCCCCCA CCCTGATGAA CGCCGGTCGC GAACTGGGGC AACTCTCGGC CTGCTTCGTG
CTTCCGGTGG GGGACTCCAT GGAGGAAATC TTCGACGCCG TCAAGTACAC CGCCCTGATC
CACAAGTCCG GCGGCGGCAC CGGCTTCTCC TTTTCCCGCC TGCGCCCGGC CAACGACATG
GTCAGCTCCA CCACCGGCAT TTCCAGCGGA CCGCTCTCCT TCATGCGGGT CTTCGACGTG
GCCACCGAGA CCATCAAGCA GGGGGGGACG CGGCGCGGGG CCAACATGGC CATCCTCAGA
GTCGACCATC CCGACATCGT GGACTTCATC ATGTGCAAGG CCGACCAGAA GCAGCTCAAC
AACTTCAACA TCTCCGTCGG CCTGACCGAG AAGTTCATGC AGGCCGTGGA GCGGGACGAG
GAGTACACCC TGGTCAACCC GCGCAACGGC AAGCAGCACG GCACCCTCAA CGCCCGCAAG
GTCTTCCAGC GCATCGTCAA GCAAGCCTGG GAGAACGGCG AGCCGGGCAT CGTCTTTTTG
GACCGCCTGA ACCGCGACAA CCCCACCCCC CAGGTGGGAG AGATCGAATC CACCAACCCC
TGCGGCGAGC AGCCGCTGCT CCCCTACGAA TCGTGCAACC TGGGCTCCAT CAACCTGGGC
AAGTTCGTGG CCGAGGGGGC CATCGACTGG AACAGGCTGA AGGAGACGGT CCGGAACGCG
GTGCACTTCC TGGACAACGT GATCGAAGCC AACAGCTACC CCCTGCAGCA GATCCACGAC
ATGACCCACG GCAACCGCAA GATCGGCCTG GGGGTCATGG GCTGGGCCGA CATGCTGATC
CTGCTGGGCA TCCCCTACAG CTCCCCCGAG GCGGTCAAGC TGGGCACGAA GGTCATGAAG
TTCATCAACG ACGAGGGGCG CCTGGCTTCC CGTGAGCTGG GCAAGGTCCG CGGTTCCTTC
CCCAACTTCA CCGGCTCGAC CTTCGACATC AAAGACGCCG AGCCGATGCG CAACGCCACG
GTAACCACCA TCGCCCCCAC CGGCACCATT TCCATCATCG CCAACGCCTC ATCCGGCGTG
GAGCCGCTCT TCGCCGTCTC CTACCTGCGC ACCGTCATGG ACAAGAACGT GCTGGTGGAG
GTCAATCCCC ATTTCGAGAG GATCGCCAAG GAGCGCGGCT TCTACTCCGA GTCGTTGATG
AAGCGCATCG CCGAGCACGG CACGGTGCAG GGCATCCCCG AAGTGCCCCA GGACGTGCAG
GAAATGTTCG TCACCGCCCA CGACATCTCC CCCAACGACC ACATACAGAT GCAGGCAGCC
TTCCAGTTGC ACACCGACAA TGCCGTCTCC AAGACCGTCA ACTTCCCCAA TTCGGCAACC
ATCGAGGACG TGGAGAACGT CTACCGCCTG GCTTACCAGA CCGGATGCAA GGGGGTCACC
ATCTACCGTG ACGGCTCCCG GGACGAGCAG GTGCTCTCCA CCGCCAAGAA GGACGAGGCG
CCTCGCGAGG CAGCCGCTGC TCCCGAAGAA AAGAAGGCGA TCAAGCGCGA CCGTCCCAAG
TCCCTCAGGG GGAGCACCCA TCAGATGCAG ACCGGCTGCG GCCCGCTGTA CGTTACCATC
AACGAGGACA GAAACGGCCT GTTCGAGCTC TTCACCACCA TGGGCAAGGC AGGCGGCTGC
GCCGCTTCCC AGAGCGAGGC CATCGGCCGC ATGGTCTCCC TGGCATGGCG CAGCGGCGTC
CAGGCCCGCC AGGTGGTCAA GCAGCTCATG GGCATCTCCT GCCACTGCCC CTCCGGCTTC
GGAGAAAACC GTGTGCTCTC CTGCGCCGAC GCCGTTGCCA AGGCCATCCA GGCCCACCTG
ATCGACGGCG GTTACGACAT CAGTGCCGTC ACCGCCCGCC AGGAGCGCGG CGCCTGCCCG
GAATGCGGCG GCGTGGTCGA ACACGAGGGG GGCTGCTCAG TCTGCCACGC CTGCGGCTAC
TCCGAGTGCG CGTAG
|
|---|
| Protein sequence | MKREKTHPTL PGLSKNALTV LEKRYLRRGP NGTTLETAAD MFRRVADTIA AADRSFDETA
DTAGLGDTFY RMMTSFEFLP NSPTLMNAGR ELGQLSACFV LPVGDSMEEI FDAVKYTALI
HKSGGGTGFS FSRLRPANDM VSSTTGISSG PLSFMRVFDV ATETIKQGGT RRGANMAILR
VDHPDIVDFI MCKADQKQLN NFNISVGLTE KFMQAVERDE EYTLVNPRNG KQHGTLNARK
VFQRIVKQAW ENGEPGIVFL DRLNRDNPTP QVGEIESTNP CGEQPLLPYE SCNLGSINLG
KFVAEGAIDW NRLKETVRNA VHFLDNVIEA NSYPLQQIHD MTHGNRKIGL GVMGWADMLI
LLGIPYSSPE AVKLGTKVMK FINDEGRLAS RELGKVRGSF PNFTGSTFDI KDAEPMRNAT
VTTIAPTGTI SIIANASSGV EPLFAVSYLR TVMDKNVLVE VNPHFERIAK ERGFYSESLM
KRIAEHGTVQ GIPEVPQDVQ EMFVTAHDIS PNDHIQMQAA FQLHTDNAVS KTVNFPNSAT
IEDVENVYRL AYQTGCKGVT IYRDGSRDEQ VLSTAKKDEA PREAAAAPEE KKAIKRDRPK
SLRGSTHQMQ TGCGPLYVTI NEDRNGLFEL FTTMGKAGGC AASQSEAIGR MVSLAWRSGV
QARQVVKQLM GISCHCPSGF GENRVLSCAD AVAKAIQAHL IDGGYDISAV TARQERGACP
ECGGVVEHEG GCSVCHACGY SECA
|
|---|
| |