| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_2482 |
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| Symbol | sdhA |
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| ID | 4574004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | - |
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| Start bp | 2688145 |
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| End bp | 2690061 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639756532 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_902145 |
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| Protein GI | 118580895 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01811] succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00128 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATACTTG ATGGAAAATG TCCTACTGGA CCTATTCAGC AAACCTGGGA CAAGCACCGC
TTCGATCTGA AGCTGGTCAA TCCTGCCAAT AAGCGTAAAT ATAACGTCAT CGTGGTCGGT
ACCGGTCTGG CCGGTGGCGC CGCCGCCGCT TCGCTCGGTG AACTGGGCTA CAATGTTCAG
GCCTTCTGTT ATCAGGATTC CCCTCGCCGC GCGCACTCCA TCGCCGCACA GGGTGGTATC
AACGCTGCCA AGAACTATCC CAATGACGGT GACTCCATCT ACCGGCTGTT CTACGACACC
ATCAAGGGGG GCGACTTCCG CGCCCGTGAA GCCGACGTCT GGCGTCTGGC CCAGGTGTCC
AACAACATCA TCGACCAGTG CGTCGCCCAA GGCGTTCCCT TTGCCCGCGA CTATGCCGGC
TACCTGGATA ACCGCTCCTT CGGTGGCGCC CAGGTTTCCC GTACCTTCTA CGCCCGTGGC
CAGACCGGTC AGCAGCTCCT CCTGGGCGCC TACACCGCCC TGTCCCGCCA GATCAACGCC
GGTACGGTCA AGATGTACAA CCGCCGCGAA ATGCTCGATC TGGTGGTGGT TGACGGCGTT
GCCCGCGGTA TTACCGTCCG CAACCTGATC ACCGGCGAGA TCGAAAGCTA TGCAGCCGAT
GCCGTCTGTT TGGCAACCGG TGGCTACGTC AACGTATTCT ACCTCTCCAC CAACGCCATG
GGCTGCTCGG TTACCGCCAT CTGGAAGGCA CACAAGAAGG GCGCCTTCTT CGCCAACCCC
TGCTACACCC AGATTCACCC GACCTGTATC CCCCAGGCCG GCGACTACCA GTCCAAGCTG
ACCCTGATGT CCGAGTCGCT GCGTAACGAC GGACGCTGCT GGGTTCCCAA GAAGAAAGAG
GACTGCGGCA AGCATCCCAA CGAGATCCCG GAAGATGCCC GTGACTACTA CCTGGAGCGC
AAGTACCCCT CATTCGGTAA CCTGGCTCCC CGCGACATCG CCTCCCGCGC CGCCAAGGAA
GCCTGCGACG ACGGTCGTGG CGTCGGCCCC GGCGGCCGTG GTGTGTACCT GGACTTCGCC
GCTTCCATCA AGCGCGTCGG CCAGCCGAAG ATCGCCGAGC GTTACGGCAA CCTCTTCGAA
ATGTACGAGA AGATCACCGA CGAGGACGGT TACAAGCGTC CCATGCGTAT GTACCCCGCG
CCGCACTACT CCATGGGCGG CCTGTGGGTC GACTACAACC TGATGAGCAA TATCCCCGGC
CTGTTCGTCC TCGGTGAGGC AAACTTCTCC GTGCACGGCG CCAACCGTCT GGGTGCTTCC
GCTCTCATGC AGGGTCTTGC CGACGGCTAC TTCGTCATTC CTTACACCAT CGGCGGCTAT
CTGGCCGGCA TCAAGGATCC GGGCACGATC AAGGCCGACC ATCCCGAGTT CAGGAAGGCC
GAGGACGACG TCAAGTCCAG CGTCAATAAA TACCTCTCCA TCAATGGCAA GAAGACAACT
TCGGAGTTTA TGCGCGAACT GGGTTCCCTG ATGTGGGAAA ACTGCGGTAT GGCTCGCACC
AAGGAATCCC TGGAGTCCAA CCTGCAGAAG ATTCCTGCAC TGCGCGAAGA GTTCTGGAAG
AATGTCAAGG TGTCCGGTAC CGGTGCTGAC TTCAATCAGC AGCTGGAAAA CGCCGGCCGC
ACCGCCGACT TCCTCGAGTT CGCCGAGCTC ATGTGCCGCG ATGCCCTGCA CCGCAACGAA
TCCTGCGGTG GCCACTTCCG CGAAGAGTAT CAGGAACTTG GCGAAGCCCA GCGTGACGAC
GTCAACTACT GCTATGTCGG CGCGTGGGAG TACAAGGGCG TTGGCAAAGA GCCCGAGCTG
CACAAAGAGC CTTTGAAGTT TGATAATGTA CATCTTGCCA TAAGGAGCTA CAAGTAA
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| Protein sequence | MILDGKCPTG PIQQTWDKHR FDLKLVNPAN KRKYNVIVVG TGLAGGAAAA SLGELGYNVQ
AFCYQDSPRR AHSIAAQGGI NAAKNYPNDG DSIYRLFYDT IKGGDFRARE ADVWRLAQVS
NNIIDQCVAQ GVPFARDYAG YLDNRSFGGA QVSRTFYARG QTGQQLLLGA YTALSRQINA
GTVKMYNRRE MLDLVVVDGV ARGITVRNLI TGEIESYAAD AVCLATGGYV NVFYLSTNAM
GCSVTAIWKA HKKGAFFANP CYTQIHPTCI PQAGDYQSKL TLMSESLRND GRCWVPKKKE
DCGKHPNEIP EDARDYYLER KYPSFGNLAP RDIASRAAKE ACDDGRGVGP GGRGVYLDFA
ASIKRVGQPK IAERYGNLFE MYEKITDEDG YKRPMRMYPA PHYSMGGLWV DYNLMSNIPG
LFVLGEANFS VHGANRLGAS ALMQGLADGY FVIPYTIGGY LAGIKDPGTI KADHPEFRKA
EDDVKSSVNK YLSINGKKTT SEFMRELGSL MWENCGMART KESLESNLQK IPALREEFWK
NVKVSGTGAD FNQQLENAGR TADFLEFAEL MCRDALHRNE SCGGHFREEY QELGEAQRDD
VNYCYVGAWE YKGVGKEPEL HKEPLKFDNV HLAIRSYK
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