Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_2476 |
Symbol | |
ID | 4573998 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | - |
Start bp | 2679699 |
End bp | 2680799 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639756526 |
Product | sugar transferase |
Protein accession | YP_902139 |
Protein GI | 118580889 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
TIGRFAM ID | [TIGR03013] sugar transferase, PEP-CTERM system associated [TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0247717 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCTGGGAC GCGGCGTGCT GGTCGGTTCC CTGCTTCTCT ACCTGCTGTT CCAGTCCGGT TGGCATGCCC TCTTTCTGCT GAGCAGGCGC CAGGAACTCT TCGCCCATCG GGTGCTGATC CTGGGGACCG GTCCGCTTGC CAGGCAGATG GGAGAGCTGC TCTCCTCCAC CAGCAGGAAC CTGGCTATCG CCGGCTACGC CCCCTGCGTC AGTTCCGCCC CCCCTGGGGG GACCGACCGG GATGATGGCG GCAGCGTCGT TCCTCCGGAA CAGGTCGTGG GGGAGGGGGG CGATCTGCTG CGCACCGCCC GCGAGACAGG GGCGGATCTG ATCGTCGTTG CCCTCACCGA ACGGCGGGGC TTCTTTCCCC TTGCTGATGT GCTCAAGTGC AAGCTGAGCG GCATAACGGT CATGGACGCC CCCTCGTTCT ACGAATTCGT CACCGGCAGC CTGCTGCTGG AATCCATCAC CCCCAGTTGG TTCATCTTCT CCAGCGGATT CCGCAGAACC ACCCTCTTCA ACATCTCCAA GAGAGTCATG GACATTCTCC TTGCCCTGGT GGGGCTGCTG CTGACCTTCC CGCTCTTCCC CCTGATGGCC GTTGCGATCA GGCTGGATTC CCCCGGCCCG GTGTTTTTCA GGCAAGAGCG CGTCGGCGCC GGCGAACGGC TGTTCACGCT GATCAAGTTC AGGACCATGC GCCAGGATGC CGAGCAGGCC ACGGGCGCAG TCTGGGCCGA GAAGAACGAC CCCCGTGTCA CCCCCCTGGG GAGCTTCCTC AGGGGCTCCC GCATCGACGA GATCCCCCAG TTGATCAACG TCCTCAAGGG GGAGATGAGC CTGATAGGCC CCCGGCCGGA GCGTCCCGAG TTCGTCGAGA AGTTGAAGCT GGTCATCCCC TACTATTCCA AACGCCACTT CATCAAGCCC GGATTGACAG GCTGGGCACA GGTCAGGTAT CCTTACGGGT CGTCCGTGGA GGATGCCGTG GAGAAGCTGC GCTATGACCT CTACTACACG AAGAACGTCT GTCCGTTTCT CGACACGCTG ATCTTCCTGG AAACCATCAA GGTCGTCCTG TTCGGACGTG GCGGCCGCTA A
|
Protein sequence | MLGRGVLVGS LLLYLLFQSG WHALFLLSRR QELFAHRVLI LGTGPLARQM GELLSSTSRN LAIAGYAPCV SSAPPGGTDR DDGGSVVPPE QVVGEGGDLL RTARETGADL IVVALTERRG FFPLADVLKC KLSGITVMDA PSFYEFVTGS LLLESITPSW FIFSSGFRRT TLFNISKRVM DILLALVGLL LTFPLFPLMA VAIRLDSPGP VFFRQERVGA GERLFTLIKF RTMRQDAEQA TGAVWAEKND PRVTPLGSFL RGSRIDEIPQ LINVLKGEMS LIGPRPERPE FVEKLKLVIP YYSKRHFIKP GLTGWAQVRY PYGSSVEDAV EKLRYDLYYT KNVCPFLDTL IFLETIKVVL FGRGGR
|
| |