| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_2474 |
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| Symbol | |
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| ID | 4573996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | - |
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| Start bp | 2677259 |
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| End bp | 2678758 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639756524 |
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| Product | lipopolysaccharide biosynthesis |
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| Protein accession | YP_902137 |
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| Protein GI | 118580887 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
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| TIGRFAM ID | [TIGR03007] polysaccharide chain length determinant protein, PEP-CTERM locus subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.56538 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGGACT CGGAATTTGA TTACAAGAAG TACCTGGAGC TGATTGTCAG GAAGAAGGAG
CTGTTTGTCA AACTGGCGCT CCTGATCATG ACCATCGCCA TTGTCACAAG CTATGTTCTG
CCCAAAAAGT ATGAGGCTTC CAGCACGGTC TTCATAGAGA AGAACGTGAT CAGCGAACTG
GTCAAGGGAA TCACGGTCAC TCCCTCCATG GAAGACACCA TCAAGGTTCT CACCTATGCC
ATCACCAGCC GCACCCTGCT CAGCAAGGCT GCCGAGAACC TGGACATGAA CGTCACCCGC
AAGGGGGGCG CGGACATGGA AGCGCTCTAC CTGACCTTGC AGAAGAATAC GGTGGTCAAG
GTCAAGGACA AGAACCTGTT CACCATCTCC TACACGGACA AGAATCCCCA GATGGCCAGG
GATTTCGTCA ACACCCTGGT CCGGCTCTAC ATCGAGGAAA ACACCTCTTC CAAGCGTGGT
GAATCCTACG ACGCCACCAA GTTCCTCGGC GAACAGATCG ACACCTTCCG GGAAAAGCTG
GAAAAGGCTG AAAAGGAACT CAACGACTAT AAACGCGACA AGGGTGGGGT GATCGCGGTG
GATGAGGCCA AGCTGTTCGA GGAGATCAAT GTTTCCCAAC AGAAGCTGTA CGACCTGGAA
CTGCGCCGCA GGCAGCTGGA GGGAATGCGC AGGGTCACCA GAAAGTCCGG CGATCCCCTG
CAGGCACGGC TTTCGGCCCT CCAGCGGCGG CTTGACGAGT TGCGCGTCCA ATACACGGAC
AGCTATCCCG AGGTTCTCCA GATAAAGGGA GACATGGAGA CAATCAGGGC ACAGCTGAAA
ACGCGAGGCA CCACCTTTCA GCCCTTGGAT CCCCAGGAGT TGGAGAAGAT CGACTCGGAG
GTCGCCGCCA TCCGGGCCAG CGAGTCCAGC CTGAGACGGT ACATCTCCAC CAACCAGTCG
CTGCTGCGCA GCCTCCCTTC CGCCAAGGCC GATCTTGAGC GCCTGGAGAC GGCGAAGAAC
AACCAGAAAA ACATCTACGA CCAGCTGTTC GCCCGCCACG GCCAGTCCGA GGTGTCCAAG
CAGATGGAGG TCCAGGACAA ATCAACCACC TTCCGTATCG TCGATCCGGC GTTACTGCCC
CAGAAACCGG TCAGCCCCAA CCGGCTGCGG ATCATGCTGC TTGGCTTCAT CGGCGGACTG
GCGGGGAGCT TCGGTCTCCT ATTCCTCCTG GACCAGATGG ACGGTACCGT GAAGGACGTG
GATTTCCTCA AGCAGTTCGG TGTCCCCGTG CTGGCGGTCA TCTCCCGCAT ACGCATCCAG
CGCGACATTG AACTGCAACG CAGGCGCACC AAGCGGTTGT GCCTGTACGC TGGAGCGTAT
TTCCTGTTTC TGCTCTGCTT TCCCCTGTCG GAACTCATCG GTTTGACCTT CATGGATACC
CTGGTGGATG CCCTCAGGCC GGCGAACCTG GTCCAGAACG TCAAGGATCA GGTGCGGTAG
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| Protein sequence | MSDSEFDYKK YLELIVRKKE LFVKLALLIM TIAIVTSYVL PKKYEASSTV FIEKNVISEL
VKGITVTPSM EDTIKVLTYA ITSRTLLSKA AENLDMNVTR KGGADMEALY LTLQKNTVVK
VKDKNLFTIS YTDKNPQMAR DFVNTLVRLY IEENTSSKRG ESYDATKFLG EQIDTFREKL
EKAEKELNDY KRDKGGVIAV DEAKLFEEIN VSQQKLYDLE LRRRQLEGMR RVTRKSGDPL
QARLSALQRR LDELRVQYTD SYPEVLQIKG DMETIRAQLK TRGTTFQPLD PQELEKIDSE
VAAIRASESS LRRYISTNQS LLRSLPSAKA DLERLETAKN NQKNIYDQLF ARHGQSEVSK
QMEVQDKSTT FRIVDPALLP QKPVSPNRLR IMLLGFIGGL AGSFGLLFLL DQMDGTVKDV
DFLKQFGVPV LAVISRIRIQ RDIELQRRRT KRLCLYAGAY FLFLLCFPLS ELIGLTFMDT
LVDALRPANL VQNVKDQVR
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