Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_2470 |
Symbol | |
ID | 4574044 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | - |
Start bp | 2672890 |
End bp | 2673795 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639756520 |
Product | polysaccharide deacetylase |
Protein accession | YP_902133 |
Protein GI | 118580883 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | [TIGR03006] polysaccharide deactylase family protein, PEP-CTERM locus subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGGCTGA ACGCCCTGAC CATAGACGTT GAGGACTATT TCCAGGTCAA CGCCTTTGCC CGGCACATCG GGCGCGAGCA GTGGGATGGC TATCCCCTGC GGGTGGAAGC CAACACCCGT CGCATCCTGG ACATGCTGGA CGAGTTCCAG GTCAAGGCCA CCTTTTTCGT GCTGGGATGG GTAGCGGAGC GGGTGCCGAC CCTGGTGCGC CAGATCCATG GCCGGGGGCA CGAGATAGCC TGCCACGGCT ATGGACATGA ACTGGTCTAC GTCATCGGCC CGGATGCCTT TCGGCGGGAT ATTCGCAAGG CCAAGGAAAT TCTGGAGGAT ATCATCGGCG AGAAGGTCCG CGGTTACCGC GCCCCCAGTT ACTCCATCAC CAGGCAGTCG CTCTGGGCGC TGGATATCCT CATCGAGGAG GGGTTTTGCT ACGACTCCAG CATCTTCCCG GTGTACCACG ACACCTATGG CATACCCGAT GCGCCCCGTT TTCCGCACGT CATCACACGC CAGTCGGGGA GCATCGCCGA ATTCCCCCTG ACCACCTATC CATTGAAATG TGGCAGCAGG GAATACCGCC TGCCCATTGC CGGGGGAGGC TACCTGCGCC TGTTTCCCGC TCACCTGCTG CGGCGTTGTA TTGCCGCCAT CAACGAACGG GAAAACCAGC CTGCCGTGCT CTACTTCCAT CCCTGGGAGA TCGATCCGGA CCAGCCGCGC ATCAAGGCCG GTTTCAAGTC GCGATTCAGG CACTACCTGA ATTTAAACAG TACGGAAGGG AAGTTACGCC ACATAATCGG CAATGCCCGT TTCGGGACAA TGGAAAGTGT ATTAAGGACA GTGGAACAGA ACTCGGAAAA CAAGATAAGC AGTGTTTTGA GGGTGAGAAT GGTGGAAGGT CGATGA
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Protein sequence | MRLNALTIDV EDYFQVNAFA RHIGREQWDG YPLRVEANTR RILDMLDEFQ VKATFFVLGW VAERVPTLVR QIHGRGHEIA CHGYGHELVY VIGPDAFRRD IRKAKEILED IIGEKVRGYR APSYSITRQS LWALDILIEE GFCYDSSIFP VYHDTYGIPD APRFPHVITR QSGSIAEFPL TTYPLKCGSR EYRLPIAGGG YLRLFPAHLL RRCIAAINER ENQPAVLYFH PWEIDPDQPR IKAGFKSRFR HYLNLNSTEG KLRHIIGNAR FGTMESVLRT VEQNSENKIS SVLRVRMVEG R
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