| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_2421 |
|---|
| Symbol | |
|---|
| ID | 4572720 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 2619948 |
|---|
| End bp | 2621156 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639756471 |
|---|
| Product | type II secretion system protein |
|---|
| Protein accession | YP_902084 |
|---|
| Protein GI | 118580834 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1459] Type II secretory pathway, component PulF |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.610249 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAATCT TTACCTGCAA ACTCGGCTCA CCAGACGGAA AGATTCTCTA CCGGGAACTT
GAAGCTTCCG ATCCGGAGTT GCTGTATAAA AGCCTTGAAG AACAAGGTTT TTTTGTTTTT
AAGGTCAGCA GGAAGCCGTT CCAGTTTCTC TTTGACAAAC GCATCGGCCG TCGTCAGCTC
GATACCCGCT CCCTGCTCAC CTTTAACCAG GAGATGTTGG TGCTGGTCAA GGCCGGCATG
CCGATCATGC AGGCGCTCAA CACCATCCTC CAGCGCCAGG ACGGCAGCCG GCTGACCGAG
GTCCTGCGGC AGGTGCGGGA TGACGTCAAG GGGGGGGCAT CCCTCTCCAC GGCCCTGGAA
CGGCATGGCC GCCTGTTTCC CCACCTGTAC ATCGCCTCGG TTCGGGCCGG GGAGCGCACC
GGCGACCTGA TCAACACGAC CAGGCGCTAC ATCCAGTACC TCAAGCGGGT TGAGGCTATC
CGCAAGAAGG TCGTCTCGGC CATGTTCTAT CCCGCCATCA TTGTTGTCGT TGCCTCACTG
GCTGTTCTGC TGCTGCTGGT GTACGTCGTG CCCACCTTCA GCCAGATCTA CGCCGATGCC
GGATCGCAGT TGCCGCTCCC CACCCAGATG CTCATCGCTT TCACGACGTT TCTGAAACGT
TTTTTCCTGG TGGGCCTGGT GCTGCTGTTT GCCGCCGCTG CCTGGTTCCG CTCCTGGGCC
GCTACGGACA ACGGAAGGTT CCTGATCGAC CGCTTCAAGA TCAGGGTACC GCTGCTGGGG
GAGATCTTCA GGAAATACTC CGTCTCCGGG TTTACCCGTA CCCTCTCCAC CGTGCTGGGA
AGCGGCATTC CGATCATCGA GTCGCTGCGC ATGTCCATCG GCACCCTGAA CAATACCTAC
ATGGAAAAGC GGCTCTTCGA GGCGGTTAAG TTCGTCGAGG AGGGGGGGAC GCTCTCCGTC
GCCTTCGAGC GCATCGGTAT CCTGCCGCCG CTGGCCCTGC GCATGCTGGG GGTCGGTGAA
ACCACCGGCG CCCTGGAAGA TATGCTGTCG GACATCTCGG ACTACCTTGA GGATGAACTG
GAAGAGCGCA TGCAGATCCT GACAACTGCC GTCGAACCGG CGGTCATGGT TGTCATGGGG
GTTGTCATCG GGGTCATCAT CATCACCATG TACCTGCCGA TCTTCAAGAT CGCGGGAACG
GTGGGGTAA
|
|---|
| Protein sequence | MAIFTCKLGS PDGKILYREL EASDPELLYK SLEEQGFFVF KVSRKPFQFL FDKRIGRRQL
DTRSLLTFNQ EMLVLVKAGM PIMQALNTIL QRQDGSRLTE VLRQVRDDVK GGASLSTALE
RHGRLFPHLY IASVRAGERT GDLINTTRRY IQYLKRVEAI RKKVVSAMFY PAIIVVVASL
AVLLLLVYVV PTFSQIYADA GSQLPLPTQM LIAFTTFLKR FFLVGLVLLF AAAAWFRSWA
ATDNGRFLID RFKIRVPLLG EIFRKYSVSG FTRTLSTVLG SGIPIIESLR MSIGTLNNTY
MEKRLFEAVK FVEEGGTLSV AFERIGILPP LALRMLGVGE TTGALEDMLS DISDYLEDEL
EERMQILTTA VEPAVMVVMG VVIGVIIITM YLPIFKIAGT VG
|
|---|
| |