| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_2399 |
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| Symbol | |
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| ID | 4572036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | - |
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| Start bp | 2596250 |
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| End bp | 2598403 |
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| Gene Length | 2154 bp |
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| Protein Length | 717 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639756450 |
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| Product | (p)ppGpp synthetase I, SpoT/RelA |
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| Protein accession | YP_902063 |
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| Protein GI | 118580813 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.088294 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAGGC TCAACGACAT CCTCGACAAG GTGGCGTCCT ATAACCCCAC CGCCGACCTG
AACCTCATCC GCAAGGCCTA CGTCTACTGC GCCAAGGTCC ATCAGGGCCA GACCCGCCTG
TCGGGCGAAC CGTACATCAT TCACCCCATG GAAGTGGCCG GTCTGCTGGC CGAGCTGCGT
CTGGACGTGG CCAGCGTCAT CACCGGCTTT CTGCACGATA CCATCGAGGA TACCCTGACC
ACCGCCGAGG AGCTGACCTC CCTGTTCGGC GATGAGGTCG CCACCCTGGT GGATGGCGTC
ACCAAAATTA GCAAGATCCA TTTCAAGACC AAGGCCGAGA GCCAGGCCGA AAATTTCCGC
AAGATGCTGC TGGCCATGTC CATCGACATC CGCGTGATCC TGGTCAAACT GGCCGACCGT
CTCCACAACA TGCGTACCCT GGAGTTTCAG CCCGAGCTGA AGCAGCGTTC CATCGCCCAG
GAGACCATGG ACATCTATGC CCCCATCGCC AATCGGCTGG GTATCTCCTG GATCAAGGTG
GAGCTGGAGG ATCTCTCCTT CCGCTACCTC AATCCGGAGA TCTATTTCGA TCTGGCGCGC
AAGATCTCCC TGAAGAAGCG GGAGCGAGAG GCCTATGTGT CCGAGGCCAA GACCGTCATC
GCCGACAAGC TGGGGCAGCA CGGCATCAAG GGAGAGGTCT CGGGGCGCAG CAAGCATCTC
TACTCCATTT ACCGCAAAAT GCTGGCGCGC AACGTTGAGT TGGACGAAAT CTACGACCTG
ATCGCCCTGC GCATCCTGGT GGACGACGTG CGCGACTGCT ACGAGGTGCT GGGGGTGATC
CACTCGGCCT GGAAGCCGAT CCCGGGGCGC TTCAAGGATT ACATCGCCAT GCCCAAGGGG
AACATGTACC AGTCGCTGCA CACGACGGTG ATCGGGCCCC ACGGCGACCG CATGGAGGTG
CAGATCCGCA CCCACGAGAT GCACAACGTA GCCGATGCCG GCATCGCGGC CCACTGGAAG
TACAAGGAAG GCAAGGGGTA CGACGAGAGG GACGTGAAGC GCTTCTCCTG GCTGCGCCAG
CTCCTGGAGT GGCAGCAGGA GCTGCAGGAC TCCCGTGAGT TCATGGATTC GGTCAAGGTG
GAGCTGTTCC CTGAGGAGGT CTACGTCTTT ACCCCCCAGG GGGATGTGAA ACCGTTCCCG
CGGGGGTCGA CACCCATCGA TTTCGCCTAT GCGGTGCACT CCGATGTGGG GCACCGCTGC
GTGGGGGCCA AGGTCAACGG CAAGCTGGTG CCGCTGAAGT ACGAGCTGAA GAACGGCGAC
ATCGTGGAGG TGATTACTTC CCCCCACCAC ACCCCCAGCA AGGACTGGCT CAAGATCGTC
AAGAGCTCCC GTGCCCGCAA CCGAATCCGG GCCTGGATCA AGACCGAGGA GCGCAAACAC
AGCATCGTGC TGGGCAGGGA AATCTGCGAG AAGGATTTCC GCAAATATTC GGTGAACCTG
CAGAAGATCC AGAAGAGCGG TGATTTCAAA CGCATCGCCG GCGAATTCGG TTTCGCCGGT
GATGATGACC TGCTGGCCGC GGTGGGGTAT GGCAGGATAA CCCCCAACCA GATCATCGGC
AGGCTGCTGC CGGAGGGGAA ACTCCAGGAA AGGACGGAGC GCAAGGAGTC GCGCCTGAGT
GCGGCCATCA ATAAGCTCAG GGGCAAGACC ACCTCCGAGG CGGTGGAGAT CAGCGGCGTG
GATGACGTGC TGGTCCGCTT CGGCAAGTGC TGCAACCCGG TGCCGGGGGA CGAGATCATC
GGCTTCATCA CCCGCGGCAA GGGGGTGACG GTGCATACGG CCGACTGTAA GTTCGCCCTT
GAGAGCGATC CGGAGCGGCG CATAGACGTG ACCTGGAACC AGAGCAAAAC CAGTGGCCTG
CCGGTCAGGA TTCGCGTGGT CTGCCATGAC GTTAAGGGGA TTCTTGCCAA CATTTCCCTG
GCCATCGCCA ACAGCGAGGC AAATATCGTC AGTGCAATGA TCCAAAGCAC GGTGGACAAG
CGGGGCGAGA ACATCTTCGA GGTGAGCGTG GTCGACCTGG CTCACCTGCA ACGGGTTATG
AACGCCCTGA TGAAGGTCAA GGGTGTAATT ACGGTGGAAA GGATGAAAAA TTGA
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| Protein sequence | MIRLNDILDK VASYNPTADL NLIRKAYVYC AKVHQGQTRL SGEPYIIHPM EVAGLLAELR
LDVASVITGF LHDTIEDTLT TAEELTSLFG DEVATLVDGV TKISKIHFKT KAESQAENFR
KMLLAMSIDI RVILVKLADR LHNMRTLEFQ PELKQRSIAQ ETMDIYAPIA NRLGISWIKV
ELEDLSFRYL NPEIYFDLAR KISLKKRERE AYVSEAKTVI ADKLGQHGIK GEVSGRSKHL
YSIYRKMLAR NVELDEIYDL IALRILVDDV RDCYEVLGVI HSAWKPIPGR FKDYIAMPKG
NMYQSLHTTV IGPHGDRMEV QIRTHEMHNV ADAGIAAHWK YKEGKGYDER DVKRFSWLRQ
LLEWQQELQD SREFMDSVKV ELFPEEVYVF TPQGDVKPFP RGSTPIDFAY AVHSDVGHRC
VGAKVNGKLV PLKYELKNGD IVEVITSPHH TPSKDWLKIV KSSRARNRIR AWIKTEERKH
SIVLGREICE KDFRKYSVNL QKIQKSGDFK RIAGEFGFAG DDDLLAAVGY GRITPNQIIG
RLLPEGKLQE RTERKESRLS AAINKLRGKT TSEAVEISGV DDVLVRFGKC CNPVPGDEII
GFITRGKGVT VHTADCKFAL ESDPERRIDV TWNQSKTSGL PVRIRVVCHD VKGILANISL
AIANSEANIV SAMIQSTVDK RGENIFEVSV VDLAHLQRVM NALMKVKGVI TVERMKN
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