| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_2341 |
|---|
| Symbol | |
|---|
| ID | 4574501 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 2529882 |
|---|
| End bp | 2530400 |
|---|
| Gene Length | 519 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 639756391 |
|---|
| Product | CRISPR-associated Cse2 family protein |
|---|
| Protein accession | YP_902006 |
|---|
| Protein GI | 118580756 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02548] CRISPR system CASCADE complex protein CasB/Cse2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGAT TCATTGAATG GCTGGAGGGC TTGAATGAAA AAGATACCAA GGTCCGCGCA
GTGCTACGGA GAAGTCTCGC TTTCACCCCC GGATTTCATG TGCCGGCTTA CCCCTACATC
GAACCTTTTA TAAAGAATGA AAGCAACTCT TGGCGGAGGG AAATGTTTTA TCTGGTTGCC
GGTCTCTGGG CGGCGCATTG GCGAGAGGAC CGAAAGGGGC AACCGGAATC TCTCGGGAAG
GCGTGTGCAA GGTATCAGGC TGCAAGTGGT TCCACCAGTA CCGAAAACCG CTTTATTTCC
TTGCTGGATG CCGATACGGA CCAGTTGCCA CACCGCCTGC GCCAAATGAT CGCGCTTCTC
AAGGAGCAAT CCATCGATTT CGAAGAGCTG TTGACGGGCC TTTTGTACTG GAACGATGAG
CAAAAACGAA CTCAGAATGG GTGGGGTCGT GATTATTACA GGAACCTGAA CAACGAAACG
GACACAGTAC ATCATAACGA TAAGGAGATT AGTGAATGA
|
|---|
| Protein sequence | MSGFIEWLEG LNEKDTKVRA VLRRSLAFTP GFHVPAYPYI EPFIKNESNS WRREMFYLVA
GLWAAHWRED RKGQPESLGK ACARYQAASG STSTENRFIS LLDADTDQLP HRLRQMIALL
KEQSIDFEEL LTGLLYWNDE QKRTQNGWGR DYYRNLNNET DTVHHNDKEI SE
|
|---|
| |