Gene Ppro_2308 details

Gene Information

• Locus tag: Ppro_2308
• Symbol: thrS
• ID: 4574914
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter propionicus DSM 2379
• Kingdom: Bacteria
• Replicon accession: NC_008609
• Strand: -
• Start bp: 2489364
• End bp: 2491274
• Gene Length: 1911 bp
• Protein Length: 636 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 639756357
• Product: threonyl-tRNA synthetase
• Protein accession: YP_901973
• Protein GI: 118580723
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0441] Threonyl-tRNA synthetase
• TIGRFAM ID: [TIGR00418] threonyl-tRNA synthetase

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.304156
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCATCTA TTTCGATTGC ACTGCCAGAC GGTTCGAAGC GTGAGATTGC ATCCGGTTCG 
ACTATTGCTG ATTTGGCTGC TTCCATCGGC GCCGGCCTTG CCAAGGCTGC CATTGCCGGG 
AAGCTGGACG GAGAACTGGT CGATCTTTCG ACGGAGCTGA AGGACGATTC CCGGGTTGAG 
ATCATCACCG AAAAGAGCCC GGAGGCGCTG ACCGTCATCC GCCACTCCGC CGCCCATCTC 
ATGGCCCAGG CGGTTAAGGA ACTGTTCCCC CAGGCCAAGG TGACCATCGG TCCTGCCATC 
GAGAGCGGCT TCTACTACGA TTTTGACATG GACGCCCCCT TCACTCCCGA AGACCTGGAG 
CGTATCGAAG CCAGGATGGC CGAACTGGCG GCTGCCAACC AGAAGATCGA GCGCAGAGTG 
CTCTCCAGCA GCGAGGCGGT CAGCCTGTTT TCGGGTATGG GTGAAAACTA CAAGGTTGAG 
CTGATCAACG ATCTGGCAGC AGAGACGGTT TCGGTTTACA GCCAGGGCGA TTTCGCCGAC 
CTCTGCCGCG GCCCCCATCT TCCCTCCACC TCGCGCATCA AGGCCTTCAA GCTGCTCTCC 
ATCGCCGGCG CCTACTGGCG CGGCGACGAG AAGAACCGCA TGCTGCAGCG CATCTACGGC 
ACGGCCTTCG CGGACAAGAA GGAGCTGGAG GCGTACCTGC ACCGCCTGGA GGAATCCAAA 
CGTCGCGACC ACCGCAGGCT GGGCAGAGAA CTGGACCTGT TCTCCTTCTC CGACGAGGTG 
GGCGCCGGCC TGGTGATCTG GCACCCCAAG GGGGCCATGC TGCGCACAAT CCTGGAGGAT 
TTCGAGCGCC GCGAGCACCT GAAGCGCGGC TACGACATCG TCCTCGGCCC GCAGATACTG 
AAGAAGGAAC TCTGGCAGCG TTCCGGCCAT TACGAAAACT ACCGCGAGAA CATGTATTTC 
ACCGAGGTTG ACGAGCAGAG CTATGGCATC AAGCCGATGA ACTGTCTCGC CCACATGATG 
ATCTACAAGT CCCATCTGAG GAGTTACCGC GACCTGCCGC TGCGCTACTT CGAACTGGGC 
ACGGTGCATC GCCATGAGCG CGCCGGCGTG CTGCACGGCC TTCTGCGCGT GCGTGGTTTT 
ACCCAGGACG ATGCCCATAT TCTCTGCGCA CCGGAGCAAC TGGACGGTGA GATCAAGGGT 
GTGCTGAAAT TCGTCAGCGA CGTCATGGCC ATCTTCGGCT TCGAGTACGA AATGGAGCTC 
TCCACCCGGC CGGAGAAATC CATCGGCGAT GATGCTGCCT GGGAACTGGC CACCGAGGCG 
CTGCTCTCGG CTCTCAAGGA TACGGGGCGC TCCTTTGAGA TCAACGAGGG AGACGGCGCA 
TTTTACGGCC CCAAGATCGA TATCAAGCTG AAAGACGCGC TTGACAGGCG CTGGCAGTGT 
GCTACTATCC AGTGCGATTT TACCCTGCCG GAACGCTTTG ACCTGCAGTA CGTTGCGGCC 
GATGGCGAAA AAAAGCGCCC GGTCATGGTG CACAGGGTCG TCCTGGGCGC CATCGAACGC 
TTCATCGGTG TGCTGATCGA ACACTACGCT GGCAACTTCC CGCTCTGGCT CTCGCCGGTT 
CAGGCCATGC TGGTCACCGT TACCGACAAC CATATCCCCT ATGCCCAGGG GGTACTGGAG 
CACCTCAGGG AAGCGGGTAT CAGGGTCCAG GGTGATTTCC GCAATGAGAA ACTGAGCTTC 
AAGATTCGCG AGGCTCAGCT CCAGAAGGTC CCCTACATGC TGGTGATCGG CGACAAGGAG 
ATGGAGTCGG CTACGGTGAC CCCGCGCTTC CGTGACGGCA AGAACCTGGT GGCCATGAAG 
CCCGAGGATT TTGTTGCCTT TGTCGTAGAG GAAACCAAGA ACTTCAGATA G 

 

Protein sequence

MSSISIALPD GSKREIASGS TIADLAASIG AGLAKAAIAG KLDGELVDLS TELKDDSRVE 
IITEKSPEAL TVIRHSAAHL MAQAVKELFP QAKVTIGPAI ESGFYYDFDM DAPFTPEDLE 
RIEARMAELA AANQKIERRV LSSSEAVSLF SGMGENYKVE LINDLAAETV SVYSQGDFAD 
LCRGPHLPST SRIKAFKLLS IAGAYWRGDE KNRMLQRIYG TAFADKKELE AYLHRLEESK 
RRDHRRLGRE LDLFSFSDEV GAGLVIWHPK GAMLRTILED FERREHLKRG YDIVLGPQIL 
KKELWQRSGH YENYRENMYF TEVDEQSYGI KPMNCLAHMM IYKSHLRSYR DLPLRYFELG 
TVHRHERAGV LHGLLRVRGF TQDDAHILCA PEQLDGEIKG VLKFVSDVMA IFGFEYEMEL 
STRPEKSIGD DAAWELATEA LLSALKDTGR SFEINEGDGA FYGPKIDIKL KDALDRRWQC 
ATIQCDFTLP ERFDLQYVAA DGEKKRPVMV HRVVLGAIER FIGVLIEHYA GNFPLWLSPV 
QAMLVTVTDN HIPYAQGVLE HLREAGIRVQ GDFRNEKLSF KIREAQLQKV PYMLVIGDKE 
MESATVTPRF RDGKNLVAMK PEDFVAFVVE ETKNFR