Gene Ppro_2252 details

Gene Information

• Locus tag: Ppro_2252
• ID: 4575011
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter propionicus DSM 2379
• Kingdom: Bacteria
• Replicon accession: NC_008609
• Strand: +
• Start bp: 2431668
• End bp: 2433533
• Gene Length: 1866 bp
• Protein Length: 621 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 639756300
• Product: ATP-dependent metalloprotease FtsH
• Protein accession: YP_901917
• Protein GI: 118580667
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0465] ATP-dependent Zn proteases
• TIGRFAM ID: [TIGR01241] ATP-dependent metalloprotease FtsH

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.000000390574
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAATCAGT TTTACAAGAA CATCTCTCTC TGGCTGGTCA TCTTCCTGAT GATGATCCTG 
CTCTACAGCA TGATCAACAA GCCCCGGGCC ACGGCAGAAA AGATCAACTT CAGCGATTTC 
ATCGCCCAGG TGGATGCGGG CAGGGTAACC TCGGTCACCA TCCAGGGCAA TGACATATTC 
GGCAAGTTCG ACGGCAAGGA TGGCAAGGAG TTCCAGACCT ACAAGCCGCT TTCCGACGCC 
GACCTGACCA AGAAGCTGCT GGAGAAAAAG ATCACCGTCA TCGCCAAACC GGATGAGGAG 
AAGTTCTCCT GGCTCTCCAT CTTCATCTCC TGGTTTCCCC TTATTTTACT GGTGGGTGTG 
TGGATATTCT TCATGCGCCA GATGCAGGTC GGCGGCGGCA AGGCCATGTC CTTCGGCAAG 
AGCCGCGCCA AACTGCTCAC CGAATCCCAG GTCAAGATCA CCTTCGAGGA CGTGGCCGGC 
ATCGAGGAGG CCAAGGAAGA GTTGAACGAG ATCATCTTCT TCCTCAAGGA CCCCAAGAAG 
TTCACCAAGC TGGGGGGCAA GATCCCCAAG GGAGTTCTGC TCATGGGCCC CCCGGGCACC 
GGCAAGACCT TGCTGGCCAA GGCCATCGCC GGCGAGGCAG GTGTCCCCTT CTTCTCCATC 
TCCGGCTCCG ACTTCGTGGA GATGTTTGTG GGCGTGGGCG CCAGCCGCGT GCGCGACCTG 
TTTCTGCAGG GCAAGAAGAG CGCCCCCTGC ATCATCTTCA TCGACGAGAT CGACGCCGTG 
GGGCGCCACC GCGGTGCCGG CCTGGGTGGC GGCCATGACG AGCGTGAGCA GACCCTGAAC 
CAGCTGCTGG TGGAGATGGA CGGCTTCGAG TCCAACGAAG GGGTGATCCT GATCGCCGCC 
ACCAACCGCC CCGACGTGCT GGATCCGGCC TTGCTGCGAC CCGGCCGATT CGACCGCCAG 
GTGGTGGTTC CCCGCCCGGA CGTGAAGGGG CGCGAGATGA TCCTCAAGGT GCATGCCAAG 
AAGGTGCCCC TGGCAAGCGA CGTGGACCTG GAGGTGATCG CCCGCGGCAC CCCCGGCTTC 
TCCGGTGCCG ACCTGGCCAA CGTGGTCAAC GAGGCGGCCC TGCTGGCTGC CCGGGCCGAC 
AAGAACCAGG TGGAGTCCAG CGATTTCGAC AACGCCAAGG ACAAGGTCCT GATGGGGGTT 
GAGCGGCGCA GCATGGTCAT CTCCGACGAG GAGAAGAAGA GCACCGCCTA CCACGAGGCG 
GGACACACCC TGGTGGCCAG GATGATCCCC GGCACCGACC CGGTGCACAA GGTCTCCATC 
ATCCCCCGCG GCCGCGCCCT GGGCGTGACC ATGCAGCTCC CCATCGAGGA CAAGCACAGC 
TACTCCCGCG AGACGCTGCT GGCGCGCATC ACCGTGCTCA TGGGGGGACG GGCCGCCGAG 
GACCTGATCT TCAACACCTT CACCACCGGA GCGGGCAACG ACATCGAGCA GGCCACTGAA 
CTGGCCCGCA AGATGGTCTG CGACTGGGGC ATGAGCGACA AGATGGGCCC GCTCTCCTTC 
GGCAAGAAGG ACGAGCAGAT CTTCCTGGGA CGGGAGATGT CCACCCACAA GAACTACAGC 
GAAGCCACGG CGGTGGAGAT CGACAACGAG ATCAGACTGA TCGTGGACGG CAGCTACCAG 
CGCGCCCTGA CCCTGCTGAA GGACAACATC CAGAACCTGC ACAACCTGTC GGAATGCCTG 
ATCGAGAAGG AGAACCTGTC CGGCGCCGAG GTGGACCGGA TCATCGCCGC CGGCGTGCCC 
ACCTGCGGCC AGGGTGCAAC GGATTCAGCA CAGCAGCAGG AACAGCACAC CGACATCCAG 
GTCTGA 

 

Protein sequence

MNQFYKNISL WLVIFLMMIL LYSMINKPRA TAEKINFSDF IAQVDAGRVT SVTIQGNDIF 
GKFDGKDGKE FQTYKPLSDA DLTKKLLEKK ITVIAKPDEE KFSWLSIFIS WFPLILLVGV 
WIFFMRQMQV GGGKAMSFGK SRAKLLTESQ VKITFEDVAG IEEAKEELNE IIFFLKDPKK 
FTKLGGKIPK GVLLMGPPGT GKTLLAKAIA GEAGVPFFSI SGSDFVEMFV GVGASRVRDL 
FLQGKKSAPC IIFIDEIDAV GRHRGAGLGG GHDEREQTLN QLLVEMDGFE SNEGVILIAA 
TNRPDVLDPA LLRPGRFDRQ VVVPRPDVKG REMILKVHAK KVPLASDVDL EVIARGTPGF 
SGADLANVVN EAALLAARAD KNQVESSDFD NAKDKVLMGV ERRSMVISDE EKKSTAYHEA 
GHTLVARMIP GTDPVHKVSI IPRGRALGVT MQLPIEDKHS YSRETLLARI TVLMGGRAAE 
DLIFNTFTTG AGNDIEQATE LARKMVCDWG MSDKMGPLSF GKKDEQIFLG REMSTHKNYS 
EATAVEIDNE IRLIVDGSYQ RALTLLKDNI QNLHNLSECL IEKENLSGAE VDRIIAAGVP 
TCGQGATDSA QQQEQHTDIQ V