Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_2220 |
Symbol | |
ID | 4575014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | - |
Start bp | 2397288 |
End bp | 2398487 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639756268 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_901885 |
Protein GI | 118580635 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATGT CGCGAAAACA GATCATTATC GGAACCGTTG TGCTCCTGGT CCTGCTGGGA ACCGGCCTGG CTGTCAAGAA GCTGTTCTTC GGCAAACCAA AGGCAACCTT TGTTACCGCC GATGCCGTCA GGATGGACCT GGAAGAGAGC GTCCTTGCCA CCGGCATCGT CAAGGCGTTC AAGACCGTCG AGGTGGGGTC GCAGGTGACC GGCCAGTTGC AGACCCTGCA CGTCGAACTT GGCGACCGGG TGAAAAAGGG ACAGCTTTTG GCCGAGATCG ATCCGGTGCT TCAGAAAAAC ACCCTCATGG ATGCCGAGGC GGAGGTGGTG AACCTGGCCG CCCAGAAACG CTCCAAGCAG GCGTTGCTGA AACAGTACGA GCTGGCCTTC AAGCGCCAAA GCCGGATGAA TGCACAGGAT GCTTCCTCCA GGTCGGACCT GGAGAGCGCC CAGGCCCAGC TGGAGAGCAC AGGCTGTGAC ATCTCCGCCC TGGATGCCCA GATCAGGAAG GCAAGAATCG CCGTGGATAA CGCAAAAGCC AACCTGGGCT ACCACCACAT CAGCGCTCCC ATCGATGGGA TTGTCATCTC CATTGATACC GAGGAGGGGC AGACGGTGGT TTCCACACAG TCTTCCACCA CCATCATAAC CCTGGCCACC CTTGATACCA TGACCGTCAA GGCCAAGATC TCCGAGGCGG ATGTCAACCG GGTCAGGCCC GGCCTGACGA CCTACTTCAC CCTGCTGGGC GATAGCGACA CGCGCTACTA CGGCAAGCTG CGGGCCATCG AACCGGGGCC GGTTTCCAGC AGTACCAGCA GTTCTAGTTC CAGCAGCAGC TCCAGCTCCA GTTCGGCAAT CTATTACTAT GGCCTGTTCG AGGTGCCCAA TCCCGCCGGG AGGCTTAAGG TCTCCATGAC CGCCCAGGTT TCCATTCTCC TCAATCAAGT CCGACAGGCG CTCTGCATCC CGGTTTCGGC CCTGGGAGAG AAGCTTAAGG ATAACCGCTA CCGGGTCAGG GTGTTGAAAG ATGGAGAAGC TCTGGAGCGA ACCATCCGCA CCGGCATCTC CAACAACGTC CAGGTGCAGG TGCTGGAGGG GTTGCGCGAA GGGGAGAAGG TGGTGGTGGG TGACAGCACG ACGCTTCCGG CAACGGAAGC ATCCGGCGCC ATGGGCGCTC CCCCGGGCGG GAGGCGCTGA
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Protein sequence | MNMSRKQIII GTVVLLVLLG TGLAVKKLFF GKPKATFVTA DAVRMDLEES VLATGIVKAF KTVEVGSQVT GQLQTLHVEL GDRVKKGQLL AEIDPVLQKN TLMDAEAEVV NLAAQKRSKQ ALLKQYELAF KRQSRMNAQD ASSRSDLESA QAQLESTGCD ISALDAQIRK ARIAVDNAKA NLGYHHISAP IDGIVISIDT EEGQTVVSTQ SSTTIITLAT LDTMTVKAKI SEADVNRVRP GLTTYFTLLG DSDTRYYGKL RAIEPGPVSS STSSSSSSSS SSSSSAIYYY GLFEVPNPAG RLKVSMTAQV SILLNQVRQA LCIPVSALGE KLKDNRYRVR VLKDGEALER TIRTGISNNV QVQVLEGLRE GEKVVVGDST TLPATEASGA MGAPPGGRR
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