| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_2166 |
|---|
| Symbol | |
|---|
| ID | 4575081 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | + |
|---|
| Start bp | 2336028 |
|---|
| End bp | 2337101 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639756214 |
|---|
| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
|---|
| Protein accession | YP_901832 |
|---|
| Protein GI | 118580582 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTACGTA CACCAGTAAC AAGCCGTCAG CAACTCGACG CCAGCCATAC AGGGAGGGTG
CATACCATGA ACGTCCTGAT TGCAAGTTCA ATTGACGGAG AGGCGATCGA AAGGCTTGAG
CAGGAGCACC AGGTCATCCG CGCTTTCCCG AACAGTAGCG AGGAGAGCCT GCACGCGCTG
ATTCGCGACT GCGAAGCCCT GGTGTTCCGC AGCGGCATAC GGGTAAGCGC CGACCTGATG
GGGTGCGCGC CCAGGCTGAA GCTGCTGGTG CGCGCCGGTT CGGGGATGGA CAACCTTGAC
GTGGAATACG CCCGAAAGCG GGGGGTACAA CTGGTGCGCA TACCGCAACC ATCGGCCAGG
GCCGTGGCGG AAATGGCCTT CGCCTTCATG CTGGCACTCA GCCGCCGCCT GCTTGAGGCC
GACCGCTCCA TGCGCAACGG GCGCTGGGAA AAGCACGAAT TTTCCGGATA CCTCCTGCGG
GACAAGACGC TGGGTGTCGT GGGCATCGGC AACACCGGCA GCTGCGTTGC CCAGATGGGG
GTTGCCTGGG GCATGCGGGT TATCGGCTGC GTCCAGCACC CTTCCCGGGA GCGGGAGGAA
GGCTTCTGCG AAAAGGGGAT TCAGATGCTG GAGTTCGACC AGGTCATAGC CAATGCCGAT
TATCTGAGCA TCCACGTCCC GCTCAAGGAT AACACGCGCA GGCTCCTGGA CGCCGATGCG
CTGAGTCGCA TGAAACCGGG CGCATACCTG ATCAACCTGG CACGGGGGGG CATTGTCGAC
GAGCAGGCTT TGTATGAATC GCTGACACAC AACGGCGGAC TGAGGGGGGC GGCGCTGGAC
GTCCACGAGC ATGAGGGTCA GGGCTGCATG TCGCCCTTGG CAATGCTGAA CAACGTCATC
CTCACGCCGC ACATCGGCGC CATGGCCATC GATGCCCAGC GGGAGATCGG CCAGAAGGTG
GTCGAAATCA TCGACGCCTT CGCGAACGCA CACGGCAGCG ACGCATGGCA GGGAAAGGTG
GCCGAAGTGG CCCAGGGCTA TACCCGCATC CAGGGGGAGG TGAACCGTGG CTAG
|
|---|
| Protein sequence | MLRTPVTSRQ QLDASHTGRV HTMNVLIASS IDGEAIERLE QEHQVIRAFP NSSEESLHAL
IRDCEALVFR SGIRVSADLM GCAPRLKLLV RAGSGMDNLD VEYARKRGVQ LVRIPQPSAR
AVAEMAFAFM LALSRRLLEA DRSMRNGRWE KHEFSGYLLR DKTLGVVGIG NTGSCVAQMG
VAWGMRVIGC VQHPSREREE GFCEKGIQML EFDQVIANAD YLSIHVPLKD NTRRLLDADA
LSRMKPGAYL INLARGGIVD EQALYESLTH NGGLRGAALD VHEHEGQGCM SPLAMLNNVI
LTPHIGAMAI DAQREIGQKV VEIIDAFANA HGSDAWQGKV AEVAQGYTRI QGEVNRG
|
|---|
| |