Gene Ppro_2153 details

Gene Information

• Locus tag: Ppro_2153
• ID: 4575103
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter propionicus DSM 2379
• Kingdom: Bacteria
• Replicon accession: NC_008609
• Strand: +
• Start bp: 2316348
• End bp: 2316794
• Gene Length: 447 bp
• Protein Length: 148 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 639756201
• Product: competence protein
• Protein accession: YP_901819
• Protein GI: 118580569
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG4537] Competence protein ComGC
• TIGRFAM ID: [TIGR01710] general secretion pathway protein G; [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.0605499
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCCCAT TTCAGCGTAT GCCAGCCCTA TCAACCCGTG CCGGTTTCAC CCTGGTCGAG 
CTGATCGTGG TCACCGCCAT ATTGGGCGTC CTGGCCATGA TGGCCATTCC AGCTTTCAAC 
GACTACAAAA CGCAAGCCCA AAACAAACGC AGCGCCGGCG ACATCCGTAC CATAGAAAAA 
GCGATCACCG CCCATATCCT GGACAGGAAC AGCCTGCCCG CATCCCTGGC CGACATCGGC 
ATGGCAACCC TGATGGACCC CTGGGGACGT CCCTACCAGT ACAACAAGGG CAGCTTACTG 
GACGACGGCT TAAACAAACT GAACGATGAC TTCGACCTGT ACTCAACGGG CAAGGATGGA 
ACCAGTGATC CTGACGGCTC CAAACCTGAA AGTGCGGACG ACATTGTACG GATGAATGAC 
GGCGGTTATG CCGGCGAGAG ATCATGA 

 

Protein sequence

MPPFQRMPAL STRAGFTLVE LIVVTAILGV LAMMAIPAFN DYKTQAQNKR SAGDIRTIEK 
AITAHILDRN SLPASLADIG MATLMDPWGR PYQYNKGSLL DDGLNKLNDD FDLYSTGKDG 
TSDPDGSKPE SADDIVRMND GGYAGERS