Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_2148 |
Symbol | |
ID | 4575131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | + |
Start bp | 2305064 |
End bp | 2308249 |
Gene Length | 3186 bp |
Protein Length | 1061 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639756196 |
Product | exodeoxyribonuclease V, gamma subunit |
Protein accession | YP_901814 |
Protein GI | 118580564 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1330] Exonuclease V gamma subunit |
TIGRFAM ID | [TIGR01450] exodeoxyribonuclease V, gamma subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCCTTA CCATCTGCAC CAGCAACAGG ATGGAGAATC TCGTAGAGGC TCTTTGCGAC GTTCTCAAGA CGCCGCTCTC ATCACCGTTC ACCCCCGAGA TCCTCGTTGT TCAGAGCAAG GGGATGCAAC GCTGGCTTGC CATGAAACTG GCAGAAACGT TCGGCGTATG GGCCAACTGC ACGTACCCCT TCCCCAACAA GGTGGTCTGG GAACTCTTTA TGAAGGCTTT CCCCGAGCTG CCCGACACCT CGCGGTTCTC CCCCGAGGTA ATGACCTGGA GAATCATGGG ACTTCTCCCC GCTTTCCTCG GACGCCAGGA ATTCACCCCG CTCAATCACT ACCTGGACGG GGATGGGGAC GGACTAAAAA AATTCCAGCT TGCGGGAAAG ATCGCCGACA CCTTTGACCA GTACACCCTG TTTCGACCCA ACATGCTCCT TGACTGGGAA GGCGGCAAGG GGGGCGATTG GCAGGAACTC CTCTGGCGGG AGCTGGCAAC CGCTGACAAC GGGCAGCACC GAGGGCGAAT CAAACAAGAC TTCATCAAGC TGCTGGCCCA AGGCCACGCG GAAAAAGAGA GCCTACCTGA ACGGATCATG GTCTTTGGCA TCTCCTATCT CCCCAGCTAT CATTTGGATA TATTCACCGA GATCGCCAAA CATACCACCG TCAGCCTCTT TCTCCTCAGC CCCTGTCGCC AGTATTGGGG GGACATCGTT TCAGCGAAGC AGATGTCCCG CCGCCCCCCC GAAGAGCGAG CCTACCTGGA GGAAGGAAAT CCCCTGCTTG CCTCCCTGGG GAAACTGGCC AGAGACTTTT CCAATATGGT TGTCGAAGCA GGGAGCATCG CAACTGACGA TGTGGATCTC TACCTGGATC CGGGCGAGGG GCTGCTTCTC GAGGCGATTC AGTCCGATAT TCTCAACCTG CGCGGGACCG AAGGCGGCGA CAGTAAACGA CGAATATCCC CCCAGGACCG GTCGGTGCAG ATCCACGCCT GCCACAGCCC CATGCGGGAG ATCGAGGTCC TCCATGACAA TCTGCTCTTC CTTTTGGAAC AGGAGAAGGG GCTCACTCCC CGCGACATCA TCGTGATGAC ACCCGACATT GAGACGTACT CACCCTATAT CTCAATGGTT TTTGGAGGAT GTCAGGACCC GCTGAAAAAG ATCCCCTTTT CCATTGCCGA CCGCACATTG GCCAAAGAGG GACAGATCGC CAGTGTCATC CTGAAACTGC TCGAGCTTCC GGGCAGCCGC CTTTCCGTTA CCCGCGTGTT CGACATCCTC CAGTCCGCTC CGGTCAGTCG CCGCTTTGAT CTGGATATAC AGGAACTGGA GACGGTGCGC AGCTGGATTG AGGACACCCG GATCCGCTGG GGAGCGGATG AAAGCCACCG ATCGAGCCTA GGCCTGCCAC ACTACCGCGA GAATTCATGG CGAGCCGGCC TGGACCGACT CATGCTCGGT TACGCCATGC CCGAGGAGGG GGATTTCCTT TTCCACGGAA TACTGCCCTA TGACGAGATG GAGGGGGACG CCACGCAGGC GCTTGGCAAG CTTGCCGAAT TTGTCGCCAG GATCGAGCGT CTGGCCAGGG ATCTCGCAGC CAAACGGACA CTCACCGAGT GGCGCGATGC CATTACCACC ATGCTCTCCG ACTTCGCTGC CGCGGACGAT GACCTGGCCC ATGAACTGGC GAGCATAAAC GGCGTCGTGC AGTCGCTTGA GGATCTGGGG GCAAAGGCCG GTTTCAGTGA AACAGTGGAC CTGGTGGTGA TCCGCTCCTG GCTTGCCTCC CGCCTTGGCG AGGAAGAGAA AGGGCTCGGC TTCCTGACCG GCGGGGTAAC CTTCTGCGCC ATGCTCCCCA TGCGCAGCAT CCCCTTTCGG GTGGTCTGCC TTATCGGCAT GAACGACGCT GCATTCCCGC GCCAGAGCCG TCCGCCGGGG TTCGACCTGA TTGCCCGCAA CCCGCAGCCC GGCGACCGTT CGCTTCGTGA CGAGGACCGC TATCTTTTCC TCGAGTGCCT GCTTTCTGCC CGTACACATT TCTACCTGAG CTACGTGGGA CAGAGCGTCA AGGACAACAG CGCGATCCCT CCGTCGGTAC TGGTCAGCGA ATTTCTCGAT GCCATCGGTG CCGGTTTCAC GAGCGGGGAG ATGACGCTGG AGCAGAGACT GGTGACAAGT CACCGCCTCC AGGCGTTCAG CAGGAGCTAC TTTGACGCCA CATCGGGCCT TTTCAGCTAT TCAGCCGAGA ACTGCGCGGC GCTCCTCGAC GCCACCCAGC GGTCCGGGGA ACCGGCGCTT TTCATTACCC ACCCCCTGAA AGCCGCTCCC GAGGAAATGA GAGAGGTGAC CCTTGCCCAG CTCGTGCGCT TCTACGCCAA CCCGGCGAAG TACCTACTGG AAAACAGGTT GAAGATCAGG CTGGAAGAGG TGTCCACTCC ACTGGATGAT CGCGAGCCTT TCGCCGTCGA GGGACTGGAA GCCTACGGCA TCAACCAGGA GTTGCTGGAA AAACGCCTGC AGGGAGGATC CGTCCATGGC CTCTACGCAA CCACCCGTTG CCGTGGCATC CTGCCTCCGG CGCAGCACGG GGAGACGGTG TTTGCCGACG CTCTCGCGGA GGTGGACAAC CTGGTCAAAA AGATTGGGGA GCGGACCGGC GGGCAACCGC GTCTGGAGGC TTTCTTTTTC CATGAGACGA TAGGAGACTT CAAACTCTCC GGCAGCCTGG ACGGCATCTG GAAGGAGCGG AAAATCTCCT ACCGCTGCGC CAAACTGAAG GCCAAGGATG AAATCAGGGG CTGGATCGAG CATCTGCTTC TTAATGCATT CGCCCCGGAG GGATATCCCC GCGAGAGCCT TGTGATCATG AAAGACGGCA GCACGGGCTT TGGCCCGGTG GAGCATCCGA CCGAGCAACT TGGCGCCCTC CTGGATTGCT ACTGGCAGGG GCTGCACCTG CCGCTCAGGT TTTTCCCGGC TTCCTCACTG GAGTTTGCCT CAAGCGGCCT GCTGAAAAAT GCACGCAAAA AATGGGAAAG CGGCTACATG CATACGGGCG AGGAAGCGGA TCCCCATTTC CGGCTCTGTT TCGAGCAGGA CGCAGATCCC CTCAACAAGG AGTTCGAGGC ATTGGCGCTG AAACTGCTCG CCCCCCTGGT GCGGCACCGT CTATGA
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Protein sequence | MPLTICTSNR MENLVEALCD VLKTPLSSPF TPEILVVQSK GMQRWLAMKL AETFGVWANC TYPFPNKVVW ELFMKAFPEL PDTSRFSPEV MTWRIMGLLP AFLGRQEFTP LNHYLDGDGD GLKKFQLAGK IADTFDQYTL FRPNMLLDWE GGKGGDWQEL LWRELATADN GQHRGRIKQD FIKLLAQGHA EKESLPERIM VFGISYLPSY HLDIFTEIAK HTTVSLFLLS PCRQYWGDIV SAKQMSRRPP EERAYLEEGN PLLASLGKLA RDFSNMVVEA GSIATDDVDL YLDPGEGLLL EAIQSDILNL RGTEGGDSKR RISPQDRSVQ IHACHSPMRE IEVLHDNLLF LLEQEKGLTP RDIIVMTPDI ETYSPYISMV FGGCQDPLKK IPFSIADRTL AKEGQIASVI LKLLELPGSR LSVTRVFDIL QSAPVSRRFD LDIQELETVR SWIEDTRIRW GADESHRSSL GLPHYRENSW RAGLDRLMLG YAMPEEGDFL FHGILPYDEM EGDATQALGK LAEFVARIER LARDLAAKRT LTEWRDAITT MLSDFAAADD DLAHELASIN GVVQSLEDLG AKAGFSETVD LVVIRSWLAS RLGEEEKGLG FLTGGVTFCA MLPMRSIPFR VVCLIGMNDA AFPRQSRPPG FDLIARNPQP GDRSLRDEDR YLFLECLLSA RTHFYLSYVG QSVKDNSAIP PSVLVSEFLD AIGAGFTSGE MTLEQRLVTS HRLQAFSRSY FDATSGLFSY SAENCAALLD ATQRSGEPAL FITHPLKAAP EEMREVTLAQ LVRFYANPAK YLLENRLKIR LEEVSTPLDD REPFAVEGLE AYGINQELLE KRLQGGSVHG LYATTRCRGI LPPAQHGETV FADALAEVDN LVKKIGERTG GQPRLEAFFF HETIGDFKLS GSLDGIWKER KISYRCAKLK AKDEIRGWIE HLLLNAFAPE GYPRESLVIM KDGSTGFGPV EHPTEQLGAL LDCYWQGLHL PLRFFPASSL EFASSGLLKN ARKKWESGYM HTGEEADPHF RLCFEQDADP LNKEFEALAL KLLAPLVRHR L
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