Gene Ppro_2148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_2148 
Symbol 
ID4575131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand
Start bp2305064 
End bp2308249 
Gene Length3186 bp 
Protein Length1061 aa 
Translation table11 
GC content59% 
IMG OID639756196 
Productexodeoxyribonuclease V, gamma subunit 
Protein accessionYP_901814 
Protein GI118580564 
COG category[L] Replication, recombination and repair 
COG ID[COG1330] Exonuclease V gamma subunit 
TIGRFAM ID[TIGR01450] exodeoxyribonuclease V, gamma subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCCTTA CCATCTGCAC CAGCAACAGG ATGGAGAATC TCGTAGAGGC TCTTTGCGAC 
GTTCTCAAGA CGCCGCTCTC ATCACCGTTC ACCCCCGAGA TCCTCGTTGT TCAGAGCAAG
GGGATGCAAC GCTGGCTTGC CATGAAACTG GCAGAAACGT TCGGCGTATG GGCCAACTGC
ACGTACCCCT TCCCCAACAA GGTGGTCTGG GAACTCTTTA TGAAGGCTTT CCCCGAGCTG
CCCGACACCT CGCGGTTCTC CCCCGAGGTA ATGACCTGGA GAATCATGGG ACTTCTCCCC
GCTTTCCTCG GACGCCAGGA ATTCACCCCG CTCAATCACT ACCTGGACGG GGATGGGGAC
GGACTAAAAA AATTCCAGCT TGCGGGAAAG ATCGCCGACA CCTTTGACCA GTACACCCTG
TTTCGACCCA ACATGCTCCT TGACTGGGAA GGCGGCAAGG GGGGCGATTG GCAGGAACTC
CTCTGGCGGG AGCTGGCAAC CGCTGACAAC GGGCAGCACC GAGGGCGAAT CAAACAAGAC
TTCATCAAGC TGCTGGCCCA AGGCCACGCG GAAAAAGAGA GCCTACCTGA ACGGATCATG
GTCTTTGGCA TCTCCTATCT CCCCAGCTAT CATTTGGATA TATTCACCGA GATCGCCAAA
CATACCACCG TCAGCCTCTT TCTCCTCAGC CCCTGTCGCC AGTATTGGGG GGACATCGTT
TCAGCGAAGC AGATGTCCCG CCGCCCCCCC GAAGAGCGAG CCTACCTGGA GGAAGGAAAT
CCCCTGCTTG CCTCCCTGGG GAAACTGGCC AGAGACTTTT CCAATATGGT TGTCGAAGCA
GGGAGCATCG CAACTGACGA TGTGGATCTC TACCTGGATC CGGGCGAGGG GCTGCTTCTC
GAGGCGATTC AGTCCGATAT TCTCAACCTG CGCGGGACCG AAGGCGGCGA CAGTAAACGA
CGAATATCCC CCCAGGACCG GTCGGTGCAG ATCCACGCCT GCCACAGCCC CATGCGGGAG
ATCGAGGTCC TCCATGACAA TCTGCTCTTC CTTTTGGAAC AGGAGAAGGG GCTCACTCCC
CGCGACATCA TCGTGATGAC ACCCGACATT GAGACGTACT CACCCTATAT CTCAATGGTT
TTTGGAGGAT GTCAGGACCC GCTGAAAAAG ATCCCCTTTT CCATTGCCGA CCGCACATTG
GCCAAAGAGG GACAGATCGC CAGTGTCATC CTGAAACTGC TCGAGCTTCC GGGCAGCCGC
CTTTCCGTTA CCCGCGTGTT CGACATCCTC CAGTCCGCTC CGGTCAGTCG CCGCTTTGAT
CTGGATATAC AGGAACTGGA GACGGTGCGC AGCTGGATTG AGGACACCCG GATCCGCTGG
GGAGCGGATG AAAGCCACCG ATCGAGCCTA GGCCTGCCAC ACTACCGCGA GAATTCATGG
CGAGCCGGCC TGGACCGACT CATGCTCGGT TACGCCATGC CCGAGGAGGG GGATTTCCTT
TTCCACGGAA TACTGCCCTA TGACGAGATG GAGGGGGACG CCACGCAGGC GCTTGGCAAG
CTTGCCGAAT TTGTCGCCAG GATCGAGCGT CTGGCCAGGG ATCTCGCAGC CAAACGGACA
CTCACCGAGT GGCGCGATGC CATTACCACC ATGCTCTCCG ACTTCGCTGC CGCGGACGAT
GACCTGGCCC ATGAACTGGC GAGCATAAAC GGCGTCGTGC AGTCGCTTGA GGATCTGGGG
GCAAAGGCCG GTTTCAGTGA AACAGTGGAC CTGGTGGTGA TCCGCTCCTG GCTTGCCTCC
CGCCTTGGCG AGGAAGAGAA AGGGCTCGGC TTCCTGACCG GCGGGGTAAC CTTCTGCGCC
ATGCTCCCCA TGCGCAGCAT CCCCTTTCGG GTGGTCTGCC TTATCGGCAT GAACGACGCT
GCATTCCCGC GCCAGAGCCG TCCGCCGGGG TTCGACCTGA TTGCCCGCAA CCCGCAGCCC
GGCGACCGTT CGCTTCGTGA CGAGGACCGC TATCTTTTCC TCGAGTGCCT GCTTTCTGCC
CGTACACATT TCTACCTGAG CTACGTGGGA CAGAGCGTCA AGGACAACAG CGCGATCCCT
CCGTCGGTAC TGGTCAGCGA ATTTCTCGAT GCCATCGGTG CCGGTTTCAC GAGCGGGGAG
ATGACGCTGG AGCAGAGACT GGTGACAAGT CACCGCCTCC AGGCGTTCAG CAGGAGCTAC
TTTGACGCCA CATCGGGCCT TTTCAGCTAT TCAGCCGAGA ACTGCGCGGC GCTCCTCGAC
GCCACCCAGC GGTCCGGGGA ACCGGCGCTT TTCATTACCC ACCCCCTGAA AGCCGCTCCC
GAGGAAATGA GAGAGGTGAC CCTTGCCCAG CTCGTGCGCT TCTACGCCAA CCCGGCGAAG
TACCTACTGG AAAACAGGTT GAAGATCAGG CTGGAAGAGG TGTCCACTCC ACTGGATGAT
CGCGAGCCTT TCGCCGTCGA GGGACTGGAA GCCTACGGCA TCAACCAGGA GTTGCTGGAA
AAACGCCTGC AGGGAGGATC CGTCCATGGC CTCTACGCAA CCACCCGTTG CCGTGGCATC
CTGCCTCCGG CGCAGCACGG GGAGACGGTG TTTGCCGACG CTCTCGCGGA GGTGGACAAC
CTGGTCAAAA AGATTGGGGA GCGGACCGGC GGGCAACCGC GTCTGGAGGC TTTCTTTTTC
CATGAGACGA TAGGAGACTT CAAACTCTCC GGCAGCCTGG ACGGCATCTG GAAGGAGCGG
AAAATCTCCT ACCGCTGCGC CAAACTGAAG GCCAAGGATG AAATCAGGGG CTGGATCGAG
CATCTGCTTC TTAATGCATT CGCCCCGGAG GGATATCCCC GCGAGAGCCT TGTGATCATG
AAAGACGGCA GCACGGGCTT TGGCCCGGTG GAGCATCCGA CCGAGCAACT TGGCGCCCTC
CTGGATTGCT ACTGGCAGGG GCTGCACCTG CCGCTCAGGT TTTTCCCGGC TTCCTCACTG
GAGTTTGCCT CAAGCGGCCT GCTGAAAAAT GCACGCAAAA AATGGGAAAG CGGCTACATG
CATACGGGCG AGGAAGCGGA TCCCCATTTC CGGCTCTGTT TCGAGCAGGA CGCAGATCCC
CTCAACAAGG AGTTCGAGGC ATTGGCGCTG AAACTGCTCG CCCCCCTGGT GCGGCACCGT
CTATGA
 
Protein sequence
MPLTICTSNR MENLVEALCD VLKTPLSSPF TPEILVVQSK GMQRWLAMKL AETFGVWANC 
TYPFPNKVVW ELFMKAFPEL PDTSRFSPEV MTWRIMGLLP AFLGRQEFTP LNHYLDGDGD
GLKKFQLAGK IADTFDQYTL FRPNMLLDWE GGKGGDWQEL LWRELATADN GQHRGRIKQD
FIKLLAQGHA EKESLPERIM VFGISYLPSY HLDIFTEIAK HTTVSLFLLS PCRQYWGDIV
SAKQMSRRPP EERAYLEEGN PLLASLGKLA RDFSNMVVEA GSIATDDVDL YLDPGEGLLL
EAIQSDILNL RGTEGGDSKR RISPQDRSVQ IHACHSPMRE IEVLHDNLLF LLEQEKGLTP
RDIIVMTPDI ETYSPYISMV FGGCQDPLKK IPFSIADRTL AKEGQIASVI LKLLELPGSR
LSVTRVFDIL QSAPVSRRFD LDIQELETVR SWIEDTRIRW GADESHRSSL GLPHYRENSW
RAGLDRLMLG YAMPEEGDFL FHGILPYDEM EGDATQALGK LAEFVARIER LARDLAAKRT
LTEWRDAITT MLSDFAAADD DLAHELASIN GVVQSLEDLG AKAGFSETVD LVVIRSWLAS
RLGEEEKGLG FLTGGVTFCA MLPMRSIPFR VVCLIGMNDA AFPRQSRPPG FDLIARNPQP
GDRSLRDEDR YLFLECLLSA RTHFYLSYVG QSVKDNSAIP PSVLVSEFLD AIGAGFTSGE
MTLEQRLVTS HRLQAFSRSY FDATSGLFSY SAENCAALLD ATQRSGEPAL FITHPLKAAP
EEMREVTLAQ LVRFYANPAK YLLENRLKIR LEEVSTPLDD REPFAVEGLE AYGINQELLE
KRLQGGSVHG LYATTRCRGI LPPAQHGETV FADALAEVDN LVKKIGERTG GQPRLEAFFF
HETIGDFKLS GSLDGIWKER KISYRCAKLK AKDEIRGWIE HLLLNAFAPE GYPRESLVIM
KDGSTGFGPV EHPTEQLGAL LDCYWQGLHL PLRFFPASSL EFASSGLLKN ARKKWESGYM
HTGEEADPHF RLCFEQDADP LNKEFEALAL KLLAPLVRHR L