| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_2130 |
|---|
| Symbol | |
|---|
| ID | 4575144 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 2288929 |
|---|
| End bp | 2289762 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639756176 |
|---|
| Product | TOPRIM domain-containing protein |
|---|
| Protein accession | YP_901796 |
|---|
| Protein GI | 118580546 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4643] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.647312 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAACC CCATTGACGG ATTCAGGCAG TTCATGAGGA ACGCCGGGCT TGAACCTCCT
GGCGAGATCG TAGCGAACGG AAGCCTTAAC CGGTTCACTG TTCCCGGTGA CAAACCGCGG
AGCCTCAACG GCTGGTATGT ATTCCATGCT GACACCCCGG CGGCCGGCTC ATTCGGTTGC
TGGAAACGGC AGCTCAACGA GACATGGAGC GCCAAGGAAT ACCACAGCAT GGACCCGGCA
GAGAAAGCCG CATACAGCGC CAAAATGGAG ACCATAAAGC GGCAGCGGGA GGAAGAGCAG
GTGCGGATCC ATGCTGAGTG CCGGGCATGG TGCGCCGATG TATGGGGCAA GGCCGAAGAC
GCCACCAACG ATCACCCGTA TCTCAAGGCC AAGGGAGTCA AGTCCTTCGG GCTGAAGTGT
TTCAGAGGTA GCCTGTTGAT TCCCATTCAG GACATCGCGG GGAATATCTA CGGAATGCAG
TTCATCCGGC CGGACGGTTC CAAAACATTC AAGACCGGCA CCGCCAAACG AGGACATTTC
TACAGCATGG GAGAGGGTAA AGGCAACACG CTTTGCATTG CTGAAGGTTA CGCAACGGCG
GCAAGCATTC ATCAGGCGAC CGGCTACCCG GTTCTTACGG CTTTCGACGC CGGAAATCTG
AAGCCGGTTG CCGAAAACGT CAGAGCGAAG GTCCCGCAGC TGAACATCAT CATCTGTGCC
GACAATGACC AATGGACCGA AGGTAACCCC GGATTGACCA AGGCAACCGA GGCGGCGCGG
GCCGTGGGCG GCTTGCTGGC AGTACCCTTT ATTGAGGGGG TACGTCATGA GTAA
|
|---|
| Protein sequence | MNNPIDGFRQ FMRNAGLEPP GEIVANGSLN RFTVPGDKPR SLNGWYVFHA DTPAAGSFGC
WKRQLNETWS AKEYHSMDPA EKAAYSAKME TIKRQREEEQ VRIHAECRAW CADVWGKAED
ATNDHPYLKA KGVKSFGLKC FRGSLLIPIQ DIAGNIYGMQ FIRPDGSKTF KTGTAKRGHF
YSMGEGKGNT LCIAEGYATA ASIHQATGYP VLTAFDAGNL KPVAENVRAK VPQLNIIICA
DNDQWTEGNP GLTKATEAAR AVGGLLAVPF IEGVRHE
|
|---|
| |