Gene Ppro_2118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_2118 
Symbol 
ID4575132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand+ 
Start bp2277761 
End bp2278306 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content61% 
IMG OID639756164 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_901784 
Protein GI118580534 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID[TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.457243 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCATTA TTCCCACCAG CATCCCCGAT GTGCTGATCG TCGAACCGAA GGTGTTCGGA 
GACGAGCGCG GCTTTTTCTT CGAGAGTTTC AACCAGCGCA TCTGGCGCGA ACTGACCGGT 
CTGGACGGCT GCTTTGTCCA GCACAACCAC TCCCGATCAA CAGCCGGAGT CCTGCGCGGT 
CTCCACTACC AGATCCACAA TCCCCAGGGG AAGCTGGTGC GGGTCGTCAG CGGAGAGGTC 
TTTGACGTGG CCGTGGATAT CCGTCGAAGT TCCGCCACCT TCGGCCGCTG GTTCGGCGCC 
GCGCTTTCGG CGGATAACAA GCGCCAACTG TGGGTACCGC CCGGTTTTGC CCACGGTTTC 
TACGTTACCT CCCCGGTTGC CGAATTCCTC TACCTGACCA CCGACTTCTG GGCGCCGGAG 
CATGAACGCT GCATAGCCTG GAACGATCCG GACCTGGCCA TCCAGTGGCC GCTTGCGGGA 
GAACCGTCCC TGTCGGACAA AGACCGAGCA GCCCCCCCCT TCAGGAAAGC GGAACTCTTT 
CCCTGA
 
Protein sequence
MTIIPTSIPD VLIVEPKVFG DERGFFFESF NQRIWRELTG LDGCFVQHNH SRSTAGVLRG 
LHYQIHNPQG KLVRVVSGEV FDVAVDIRRS SATFGRWFGA ALSADNKRQL WVPPGFAHGF 
YVTSPVAEFL YLTTDFWAPE HERCIAWNDP DLAIQWPLAG EPSLSDKDRA APPFRKAELF 
P