Gene Ppro_2090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_2090 
Symbol 
ID4573331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand+ 
Start bp2249863 
End bp2250282 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content58% 
IMG OID639756136 
Productnickel responsive regulator 
Protein accessionYP_901756 
Protein GI118580506 
COG category[K] Transcription 
COG ID[COG0864] Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain 
TIGRFAM ID[TIGR02793] nickel-responsive transcriptional regulator NikR 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.000414666 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCGAGA CCATTCGCTT CGGAATTTCC ATTGACGATA AACTACTGGA AAGCTTTGAC 
CAACTGATTG AGCACAAGGG GTATGCCAAC CGCTCAGAGG CGCTGCGGGA TCTTATCCGA 
GCCTCGCTGA TCGATGTGAA GTGGGAAAAC GGGGAGGAGG AGATGGTCGG CACCGTGACC 
CTGGTGTTCA ACCACCACGT GCGCGACCTG TCCGACAAGC TGACCGAGCA CCAGCACGCC 
TATCACCACC AGATCATCTC GGCGCTGCAT GTGCATCTGG ATGCCCACAA CTGCCTGGAA 
GTGTTGGTGG TGCGGGGAAA GGCGCGGGAG ATCAAGAAGA TCGCCGACGA GCTGATCGGC 
GTCAAGGGGG TCAAGCATGG CAAGCTGGTC ATGACCGCCA CCGGCCATGA CCTGCACTGA
 
Protein sequence
MGETIRFGIS IDDKLLESFD QLIEHKGYAN RSEALRDLIR ASLIDVKWEN GEEEMVGTVT 
LVFNHHVRDL SDKLTEHQHA YHHQIISALH VHLDAHNCLE VLVVRGKARE IKKIADELIG 
VKGVKHGKLV MTATGHDLH