| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_2089 |
|---|
| Symbol | |
|---|
| ID | 4573330 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 2247177 |
|---|
| End bp | 2249585 |
|---|
| Gene Length | 2409 bp |
|---|
| Protein Length | 802 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639756135 |
|---|
| Product | PAS/PAC sensor hybrid histidine kinase |
|---|
| Protein accession | YP_901755 |
|---|
| Protein GI | 118580505 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG5002] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0236176 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCTATA CGATTAGCGA ACTCATCGAT ATCGATGAAC TCCGGTCGCT GTGTGAACTA
TTCACGCGCA TGACCGGCTT CGTAACCGCC ATTCTCGACA TGGAGGGGAA TATCCTCATT
GCCACCGGCT GGCAGGATAT CTGCACCCGC TTTCACCGCG CCACCCCCGC TTCCGCCGCC
CGCTGCCGGG AGAGTGACGT CTATCTGGCC GGGAAGTTGC TACAGGGGGA AACCTACACC
CTGTATGCGT GCAGAAACGG TCTGGTGGAT GTGGCGGTAC CCATCGTGGT GGCGGGGATG
CAGGTGGGCA AGCTGTACTC GGGGCAGTTC CTGTTTGCGC CGCCCGATAC GGATTTTTTC
CGGCGCCAGG GGGCTGAATT CGGTTTCGAC GAGGCTTCCT ATCTGGAGGC GCTGGCCAGG
GTTCCGGTTG TCAGCGAGGA GCGGGTGCGC CTGGTCATGG AGTTTCTCTG CCGTCTGGCC
GAGATGATCG GCAGGATGGG GCTGGCCAGC AAAAATGCCC GCCAGGCCAG TCTGGTGGTG
GAAAATAGCC CGGTGACGCT CTTTCGCTGG AAGGCGGCCG CGGGATGGCC GGTGGAGTTC
GTTTCTGAGA ATGTGGTCCA GTTCGGGTAT GCGCCGGAAG AACTCCTGTC CGGGAATGTT
TCCTTTGCCA GTCTGATCCA CCCCGCCGAC CTGGAGCGGG TGGTGGCCGA GGTGGGCGGG
AACGGCGAGG ATGTTTCCGA TACGCTTTCC CAGGAGTACC GTCTCGTCAC CAAAAGCGGT
GAGGTGCGCT GGGTTGATGA CCGCACCACG GTGGAGCGTG ACGGAGAGGG GAGGATCACC
CATTACCAGG GTATCGCCAT GGATATCACC GAACGGAGGC ATGCCGCCGA TGAACTTGCC
ATGGAAAAGG AACGCCTGGC AGTGACGTTG CGTTCCATCG GTGACGGGGT GATCACCGCC
GATATGGAGG GTAGGGTGAT CCTGCTCAAC AAGGTGGCCG AGGAACTGAC CGGCTGGAAG
CAGGAAGAGG CGCGGGGAAA GGCGTTTGAT GAGGTCTTCC GCATCATCGA TGAGAGAACG
CGCCAGCAGC GCTCCAGTCC GGTGGCCCAT GTGCTGAAGA ACGGTAGCGG TTCCGAGCTT
GCCCACAACA CCGTACTGGT GGCCAGGGAC GGCCGGGAGC GGTTGATCGC CGACAGCGTG
GCGCCGATCC GGGACCGGGA GAGTCGGTTG GTGGGGGTGG TGCTGGTGTT CCGCGACATC
ACCGAAAAGA AGAGGATCGA GCAGGAGCTG TTCAATGCCC ACCGGCTGGA ATCCATCGGC
GTCCTGGCCG GCGGCATCGC CCACGACTTC AACAACCTGC TGACCGCCAT CCTGGGAAAT
ATCTCTCTGG CCAAGATGCT CGTCTCCGAG GGGGACAGGA TGTTCAGGAA CCTGGATGAA
GCGGAGAAGG CCTCCCTGCG GGCCAAGGGG CTGACCCAGC AGCTTTTGAC CTTCTCCCGC
GGCGGCGCGC CGGTGCGCAG GACCCTGTCT CTGGCCGCCA TCATCAGGGA ATCGGCGGCC
TTCACCCTGT CCGGTTCCGG AACAACCTGC CGTTTTATTC TGCCCGAAGA TCTCTGGCCG
GTGGAGGCGG ACGAAGGGCA GATCAGTCAG GTGATCAACA ATCTGGTGCT TAACGCCGAT
CAGGCCATGC CAGGCGGGGG GGAGGTCGAG ATCAGCTGCG CCAATGTGGT CATTGACGCG
AAATCGCAAC TTCCGTTGCC GGCCGGCGCC CATGTGCGCA TCGCGGTCAG CGACCGGGGC
CAGGGCATCC CCCAGGAAGC CATTACCCGT ATCTTCGACC CCTACTTCAC CACCAAGCGG
AACGGCACAG GACTCGGCCT GGCAACGGTC TATTCCATCA TCAGGAACCA TGACGGCCAC
ATAGCCGCGA CCTCACGCCA GGGTGGAGGC TCAACCTTCA CCATCCATCT TCCCGCCCTG
GTGGAGGGGG AGGTGCCGGT GGCGCCCGAG GAGACGGTGG TAGATTCGGG AAGGGGGACG
GTGCTGGTCA TGGATGACGA GGAGAGTATC CGGGAGATCG CCGGAGAGAT GCTCTCCTAT
CTGGGATACG ACGCGACCGT TGCCTGTGAC GGCGCCGAAG CGGTGGAGCT GTACCGCCAG
GCGCGGGAAA GGGGGCAGCC ATTTAGCGTC GTGCTCATGG ATCTCACCAT TCCGGGCGGC
ATGGGGGGGA GGGAGGCCAT CACCCGTCTG CGCCAGATGG ACGAATCGGT GCTGGCGGTG
GTCTCCAGCG GCTACTCCAC CGATCCGATC ATGGCCGACT ACCGTGCCTA TGGCTTTAGC
GGCGTGATCA TCAAGCCGTA CCGGGTGGCG GAGCTGAAAA GCGTGCTGGA TCAACTTCTG
GCCAGCTGA
|
|---|
| Protein sequence | MTYTISELID IDELRSLCEL FTRMTGFVTA ILDMEGNILI ATGWQDICTR FHRATPASAA
RCRESDVYLA GKLLQGETYT LYACRNGLVD VAVPIVVAGM QVGKLYSGQF LFAPPDTDFF
RRQGAEFGFD EASYLEALAR VPVVSEERVR LVMEFLCRLA EMIGRMGLAS KNARQASLVV
ENSPVTLFRW KAAAGWPVEF VSENVVQFGY APEELLSGNV SFASLIHPAD LERVVAEVGG
NGEDVSDTLS QEYRLVTKSG EVRWVDDRTT VERDGEGRIT HYQGIAMDIT ERRHAADELA
MEKERLAVTL RSIGDGVITA DMEGRVILLN KVAEELTGWK QEEARGKAFD EVFRIIDERT
RQQRSSPVAH VLKNGSGSEL AHNTVLVARD GRERLIADSV APIRDRESRL VGVVLVFRDI
TEKKRIEQEL FNAHRLESIG VLAGGIAHDF NNLLTAILGN ISLAKMLVSE GDRMFRNLDE
AEKASLRAKG LTQQLLTFSR GGAPVRRTLS LAAIIRESAA FTLSGSGTTC RFILPEDLWP
VEADEGQISQ VINNLVLNAD QAMPGGGEVE ISCANVVIDA KSQLPLPAGA HVRIAVSDRG
QGIPQEAITR IFDPYFTTKR NGTGLGLATV YSIIRNHDGH IAATSRQGGG STFTIHLPAL
VEGEVPVAPE ETVVDSGRGT VLVMDDEESI REIAGEMLSY LGYDATVACD GAEAVELYRQ
ARERGQPFSV VLMDLTIPGG MGGREAITRL RQMDESVLAV VSSGYSTDPI MADYRAYGFS
GVIIKPYRVA ELKSVLDQLL AS
|
|---|
| |