| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_2072 |
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| Symbol | |
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| ID | 4573712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | - |
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| Start bp | 2225798 |
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| End bp | 2227279 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639756118 |
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| Product | TPR domain-containing protein |
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| Protein accession | YP_901738 |
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| Protein GI | 118580488 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.402208 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAAGCC GAGCCAAGAA ACAGCACCTC CACGCGGATG GCGGGAAACC TATGATCACA
TGGATACGGA AGTTATTGGG AAAAGAACCG TCGTTCGAAC AGTCGCCACC GATGCCCCGG
GAACCCCAGG ACCATTCGTC CCATGACTCA GCTCAACAGA CCGGTGTTGC CGGGCCTGAG
GCAGATCTCC CGGTCCCCGA GGAGTGGCGG CCGCTGCTGA CTGAAATGGA GCAGAGCAGC
GGGCACTTCT TTGTCACCGG CCAGGCAGGA ACCGGGAAAT CGACCCTGAT CGGACTGTTC
CGCCGCCTGA CGGGGAAAAA TGTCGTCGTG GTGGCTCCCA CCGGACTCGC CGCCATCACC
GCCCAGGGCG TTACCATCCA TTCACTGACC CGGTTCCCGC CGACGGTGAT AACGAGGGAC
AGCGTCGGGG AAATCACCGA AAAGCATCTG ATACGGGCAA TAGATACCAT CATCGTTGAC
GAGGTAAGCC AGGTTCGCTG CGACCTGCTG GACGGCCTGG ACCATTTCAT GCGCAGAAAC
GGCAGGGACA AAGAGTTGCC ATTCGGAGGC GTTCAGGTCA TCCTGGTGGG TGACCCCTGC
CAGCTCCCTC CAGTGGTGAG CGATGGGGAA CGACAATCCC TGGAGCGGGC CGGATACCCG
GGCCCCTTTT ATTTCTGGAA CTCCAGCGTC TACGGGGAAA TCAACCCGCG CAGGCTGGAG
TTGAAAACAC GGTTCCGCCA GGCCGAGCAG GACTTTCTCG ATCTGCTGGG TTGCATCCGC
ACAAACGATG TCCACACCGG AAAACTCGAC CTCCTGCAGC AGTGCATGGC AGACACTGAT
TTCGACCCCT TTTTCCGTCC GTTCCATACC ATGCTGACTT GGCGCGGTGA TGAAGCCGGA
TATTACAACA ACAGGGAGTT CTACCGGCTT CCCGGCCCCC GGCAGGAGTA CCGGGCGAAA
CGCACTGGCT CGGCGCTCAA CATCAACAAC CCTGAGTACA ATTTCCCCTG CGAGGAAAAC
CTCCTGCTGC GGGTGGGGGC TCGCGTCATC TGCTGCCGGG ACATCAGTGC AGAGCTTCTG
AACGGAACCA TGGGAACGGT CGTGGAACTG GAAGATGAGG CGGTCTTGAT TCGAGCCGAC
GACGGCAGGA GTCTGCGGGT ACTCCCTGCG GTATGGGAGC TGATCACGTA TTCCTACAGT
CGGGAAACGG GGAAGATAGA GTCGACGGTT ACCGGAACCA TCGAACAGAT TCCGCTGCGT
CATGCCTGGG CGCTCAGCAT CCACAAAGCC CAGGGGGTGA CCCTGGATCA GGTGCACATC
GATCTCTCGG ACGCGGCATT CCCCCCCGGA CAGGCGTACA TTGCCCTCAG CCGCTGCCGC
TCCTTCGCGG GGACCAAGCT CAAAACCAAG TTTTTCAATC TTGATCCAGG GGATGTCATG
GTGGACGGTG ATATAGTCGA GTTCATGTCA TCATTGTCTT GA
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| Protein sequence | MGSRAKKQHL HADGGKPMIT WIRKLLGKEP SFEQSPPMPR EPQDHSSHDS AQQTGVAGPE
ADLPVPEEWR PLLTEMEQSS GHFFVTGQAG TGKSTLIGLF RRLTGKNVVV VAPTGLAAIT
AQGVTIHSLT RFPPTVITRD SVGEITEKHL IRAIDTIIVD EVSQVRCDLL DGLDHFMRRN
GRDKELPFGG VQVILVGDPC QLPPVVSDGE RQSLERAGYP GPFYFWNSSV YGEINPRRLE
LKTRFRQAEQ DFLDLLGCIR TNDVHTGKLD LLQQCMADTD FDPFFRPFHT MLTWRGDEAG
YYNNREFYRL PGPRQEYRAK RTGSALNINN PEYNFPCEEN LLLRVGARVI CCRDISAELL
NGTMGTVVEL EDEAVLIRAD DGRSLRVLPA VWELITYSYS RETGKIESTV TGTIEQIPLR
HAWALSIHKA QGVTLDQVHI DLSDAAFPPG QAYIALSRCR SFAGTKLKTK FFNLDPGDVM
VDGDIVEFMS SLS
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