| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_2048 |
|---|
| Symbol | |
|---|
| ID | 4573891 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | + |
|---|
| Start bp | 2197192 |
|---|
| End bp | 2197947 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639756094 |
|---|
| Product | undecaprenyl pyrophosphate synthase |
|---|
| Protein accession | YP_901714 |
|---|
| Protein GI | 118580464 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
|---|
| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.454425 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGAGC TCGACCCTGA ACGGCTCCCC GTCCATCTGG CAATCATCAT GGATGGCAAC
GGACGCTGGG CCCAGCAGCG CATGCTCAAA CGCATCGTCG GCCACCAGCG GGGCGCCGAG
ACGGTCAACA TGGTTGTGGA ACATGCCTGG CGCCTGGGCA TACAATACCT GACCCTGTTC
GCCTTCTCCT CCGAGAACTG GTCCCGGCCG GCAATCGAGG TGCGCGCCCT CATGTCCCTG
CTGAAGAAGT ACATCCGCAA GGAGACGGCG CGCATGATGC GCAAGAACAT CCGCTACAAT
GTCATCGGCA ACCGCAGCGA CCTTCCCGTC GATGTCAACG AGACACTGGA TGAGGCCATC
AAGCAGACCT CGGTCAATAC CGGCATGACG CTCACCCTGG CGCTCTCCTA CGGCGGGCGC
CAGGAACTGA GCATGGCTGC CCGCCGCCTC GCATGCGACG TCCGTGACGG GAAAATAACC
CCCGATGACA TTTCGGTGGA AAACTTCGGC ACCTATCTGG ATACGGGCGG CCTGCCGGAC
CCGGATTTTC TGATCCGCAC CAGCGGCGAG ATGCGCATCA GCAATTTCCT GCTCTGGCAA
CTGGCCTATA CCGAGCTCTA CTTTACCGAA ACGAACTGGC CCGACTTCAC CATCAACGAG
TTCAACAAGG CCCTGATCGA TTTTCAGTCC CGTGAACGCC GCTTCGGCAA GACCAGCGAC
CAGATCTCCC CGAGGAACAA GCCATCAAAC GCCTGA
|
|---|
| Protein sequence | MRELDPERLP VHLAIIMDGN GRWAQQRMLK RIVGHQRGAE TVNMVVEHAW RLGIQYLTLF
AFSSENWSRP AIEVRALMSL LKKYIRKETA RMMRKNIRYN VIGNRSDLPV DVNETLDEAI
KQTSVNTGMT LTLALSYGGR QELSMAARRL ACDVRDGKIT PDDISVENFG TYLDTGGLPD
PDFLIRTSGE MRISNFLLWQ LAYTELYFTE TNWPDFTINE FNKALIDFQS RERRFGKTSD
QISPRNKPSN A
|
|---|
| |