| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_2020 |
|---|
| Symbol | |
|---|
| ID | 4574689 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 2169402 |
|---|
| End bp | 2170877 |
|---|
| Gene Length | 1476 bp |
|---|
| Protein Length | 491 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639756066 |
|---|
| Product | outer membrane efflux protein |
|---|
| Protein accession | YP_901686 |
|---|
| Protein GI | 118580436 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1538] Outer membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0936605 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGTGA TAGCACTGCT CTTCTGCTGG ACGGCCTGCG CCTGGGCTTC AGGCCAGCCG
ATACGGCTCT CCCTGGGTGA GGCGGTCCGG ATGGCGGCGG AGAAAAACCT GGACGTGCGG
GCCGAACTGT ACACGCCGGC CCAGTACCAG GCCGACATCA ATCGCAACAG GGCAATCTAC
GATCCGCAAC TGAACATTGA GACGCACTAC AGTGATTTCA CCAACCCTGT ATCCGGTTCC
TATGGCAGCG CCTCCAACAA GGGGCACTCC TTTGTGCTGG ACTCCTCCCT CAGCCAGCTG
TTCTGGACCG GAGCTACCGC GACACTGGGA TTCAACAACA GCCACACCAA GACCAACCAG
TTCTCCTCCC TGAATAACTA CTGGCAGTCC AGTCTCGGCG TCACGCTCAG CCAGCCGCTG
CTCAAGAATA TGGGGCGCGA TGCTACCGAT CTCGGCATTT CCATTTCACG ATTCTCCAAA
TACGCATCCA TGGAGCATTT CCGAAATCTC CTGCTGAATA CCGTCAGTCA GGCCAGAACG
GAGTATTTCA AGCTCTACGG CTTGCAGGAG GTGCGGGAGG TCAAGCGGGT ATCTCTGGCG
TTGGCCCGCA GGATTCTCGA CGAAACCAGG GCCAGGGTTT CCGCCGGTGT CCTGCCGGCC
ATGGAAATAT TAAATGCCGA ATACGGCGTG ACGACACGGG AAAGGGAGCT GATTGCCGCC
GAGAAAGAGG TTAACGATCA GGTGGATGTT CTGCGACTGC TCCTGCAGAT TTCCGGCAAA
GGGGAGATTG TCATCAGCGA CACGCCGCGC CGCGCGCCGT ATCCGCTGGA CCAGGATCAG
GCCCTGCGAC AGGCTATGGG CCGTCCAGAT ATCAGGGAAC TGCAACGGAG CCTGGACATC
AGCGAACTCC AGTCCCGCGT CTTTGGCAAC AATATCAAGC CCGATCTCAA TTTGAGCCTC
TCCGGTTCGC TGGTCGGGCA GGGCCACAGC TACGGCCGCG ATATTGGGGA TCTGGGAAGC
TTTGATTACC CCGCCTGGAG CATCGGTCTG GTCTTCAAAT ACCCCTTGGG AAACAATGCT
GCGGAAAACG ACTATCGCAA GAGTCGTCTC AAAAATGCCC AGACCGCCCT GCAGATCCGC
AGTCTGGAGG AGAGCGCGAA GAACGAGGTG CTCAGCTTCA TCCGCGCCAT CGATAGCGCG
TTCAAGCAGA TCGAGGTCGC TGACCGGGGC AGGGCCTTTG CCGAAGAGCG TCTTCGCGCA
TTTATGCGCA AGAACAGCGT CGGACTGGCT ACCACAAAGG ACGTGCTCGA AGTGGAACAT
GACCTGGCCG ATGCCAAGAA CAGCCAGATT GCGGCAGCCG TTGCCCATGA CAATGCCATT
ACTCGTTTCC TGCAGGCGAC GGGCCAACTA CTCGACCAGG AGGGGGTCCG TTTCGTCGAG
GGCGACGCTG ACCGCCTCTA CCTGAATATC TACTGA
|
|---|
| Protein sequence | MVVIALLFCW TACAWASGQP IRLSLGEAVR MAAEKNLDVR AELYTPAQYQ ADINRNRAIY
DPQLNIETHY SDFTNPVSGS YGSASNKGHS FVLDSSLSQL FWTGATATLG FNNSHTKTNQ
FSSLNNYWQS SLGVTLSQPL LKNMGRDATD LGISISRFSK YASMEHFRNL LLNTVSQART
EYFKLYGLQE VREVKRVSLA LARRILDETR ARVSAGVLPA MEILNAEYGV TTRERELIAA
EKEVNDQVDV LRLLLQISGK GEIVISDTPR RAPYPLDQDQ ALRQAMGRPD IRELQRSLDI
SELQSRVFGN NIKPDLNLSL SGSLVGQGHS YGRDIGDLGS FDYPAWSIGL VFKYPLGNNA
AENDYRKSRL KNAQTALQIR SLEESAKNEV LSFIRAIDSA FKQIEVADRG RAFAEERLRA
FMRKNSVGLA TTKDVLEVEH DLADAKNSQI AAAVAHDNAI TRFLQATGQL LDQEGVRFVE
GDADRLYLNI Y
|
|---|
| |