| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_2006 |
|---|
| Symbol | |
|---|
| ID | 4572677 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 2154702 |
|---|
| End bp | 2155232 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639756052 |
|---|
| Product | redoxin domain-containing protein |
|---|
| Protein accession | YP_901672 |
|---|
| Protein GI | 118580422 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1225] Peroxiredoxin |
|---|
| TIGRFAM ID | [TIGR00385] periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0112011 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAC GTCTCTGTCT GCTGGCGCTG GCAATCCTGG CCGCGCTGAC CATGGCCTGC
CAGCGGAACG AACAGGGGAT CGAAGGAGCT GCTTTCACGG CCGCCGAAAA CAGGCCCGCC
CCGGAGATCG TTGTCAGCGA CTTAAACGGC GGCAGCCTGC GGCTCTCCCA GCTGAAGGGG
AAGGTGGTGC TGCTTAACTT CTGGGCCACC TGGTGCCCCC CCTGCCGGGA AGAGATCCCC
TCCATGATGA GGCTCAACGC CTCCATGGCC GGCAAGCCGT TCCAGATGGT TGCCGTCTCC
CTGGACGAGG GGGGCAAAAC GGCCATAGAG GAGTTCTTTC GCGCTCACGG CTTTCTGCTG
CCGGCCTACA CCGACGCCCA GGGCAAGGCT GCCAGCGTCT ACGGCGTCAG CGGCGTTCCG
GAGACCTTTG TCATCGACAA AAGCGGCATC GTCGTCAAAA AGATCATCGG TCCCCTTGCC
TGGGATGCTC CCGATACAAT TGCCTTTCTT GAGGACCTGA TGAAGAAGTA G
|
|---|
| Protein sequence | MKKRLCLLAL AILAALTMAC QRNEQGIEGA AFTAAENRPA PEIVVSDLNG GSLRLSQLKG
KVVLLNFWAT WCPPCREEIP SMMRLNASMA GKPFQMVAVS LDEGGKTAIE EFFRAHGFLL
PAYTDAQGKA ASVYGVSGVP ETFVIDKSGI VVKKIIGPLA WDAPDTIAFL EDLMKK
|
|---|
| |