| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_2002 |
|---|
| Symbol | |
|---|
| ID | 4572673 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 2150069 |
|---|
| End bp | 2151490 |
|---|
| Gene Length | 1422 bp |
|---|
| Protein Length | 473 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639756048 |
|---|
| Product | two component, sigma54 specific, Fis family transcriptional regulator |
|---|
| Protein accession | YP_901668 |
|---|
| Protein GI | 118580418 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACG GCGCCACCTT CACCATCCTG ATCGTGGATG ACGAGCAGCA CATCCTGTTT
TCTTCCGAAT CCCTGCTCCG TTTTGCCGGT TTCAGGGAGA TACGCACCCT GGATGACAGC
CGACGGGTAC TGTCGCTGCT GGAAAAGGAG ACGATCGACC TGATCGTCCT GGACCTGTTC
ATGCCGTATG TGTCCGGCAG GGAGCTGCTG ACCCTGCTCA GCCGCGATTA TCCCCACATT
CCGGTGATTG TCATGACCGC GGCCGACGAG GTCGATATTG CCGTCGACTG CATGAAGGGG
GGTGCCTTCG ACTACCTGGT GAAGCCGGTG GAGAATGCCC GCCTGGTCTC CTGTGTGAAG
AGGGCGCTGG AGATCAGCAG TCTGAAGAAC CAAGTGTCCC AACTGCGAGA GCACCTGCTC
AGTAACCGCA TCGAGAATCC CGGCGCCTTT TCCGCCCTGG TCTCGGTTAG TCCAAAGATG
TCGGCCATCT TCCAGTACTG CGAGGTCATC GCCAGATCGC GGCAGCCGGT GATCATCAAC
GGCGAGACCG GCACCGGCAA GGAGCTGATC GCCAAGGCGA TCCACACGGC AAGTGGGCTC
AAGGGGAAAT TCGTGCCGGT CAACGCTGCC GGTCTGGACG ACAACATGTT TTCCGACACC
CTCTTCGGCC ACAAGAAGGG GGCCTTTACC GGCGCGGACC AGGCCCGGGC CGGCCTGATA
GCCCAGGCCT CGGGCGGGAC CCTGTTTCTG GACGAGATCG GTGACCTGCA CGAGGTATCC
CAGGTCAAGC TCCTGCGCCT GCTCCAGGAA CAGGAGTACT ACCAGGTCGG TTCCGACATG
CCGCTGGTCA GCGATGCCCG CGTCATCGTG GCAACCAACA GGGATCTCCG GGAACTGACC
GCGACGGGGA AGTTCCGCAA CGACCTCTAC TTCAGGCTCT GCACCCATCA GGTTCAACTT
CCCCCCCTGC GGAAGCGTGC GGAGGATATT TCGGTGCTTT TGAACCATTT TCTGGAGGAG
TCGGCACAGG AGCTGAAAAA GAAGAAGCCG TCCTACCCCC CGGAACTGGT CACCCTCCTC
TCCCTGTATG ATTTTCCCGG CAACGTGCGC GAGATGAAGG CGCTCATCTT CGACGCCGTG
GCCCGCCACG GCAGCGGCGT CCTCTCCCTG GAGCGCTTCA GGGAGCACAT TGGAATCCGC
TCTGCACCGC CGGCCTCCGC TTCCCTTCCG GTAAAGGGTG TGGTGGACGG GTTGCGGCAG
GCGCTGGACA GGCTTCCCAC GGTGCGCGAG GTGGAGGAGT ACCTGGTGGA CGAAGCCATG
AAGCTTGCCA ACGGCAATCA GGGGATTGCC GCCTCACTGC TGGGATTCAC CCGCCAGACC
CTGAACAAGC GCCTGCGCAA GAACAGGGAA AACCTCCCCT GA
|
|---|
| Protein sequence | MTDGATFTIL IVDDEQHILF SSESLLRFAG FREIRTLDDS RRVLSLLEKE TIDLIVLDLF
MPYVSGRELL TLLSRDYPHI PVIVMTAADE VDIAVDCMKG GAFDYLVKPV ENARLVSCVK
RALEISSLKN QVSQLREHLL SNRIENPGAF SALVSVSPKM SAIFQYCEVI ARSRQPVIIN
GETGTGKELI AKAIHTASGL KGKFVPVNAA GLDDNMFSDT LFGHKKGAFT GADQARAGLI
AQASGGTLFL DEIGDLHEVS QVKLLRLLQE QEYYQVGSDM PLVSDARVIV ATNRDLRELT
ATGKFRNDLY FRLCTHQVQL PPLRKRAEDI SVLLNHFLEE SAQELKKKKP SYPPELVTLL
SLYDFPGNVR EMKALIFDAV ARHGSGVLSL ERFREHIGIR SAPPASASLP VKGVVDGLRQ
ALDRLPTVRE VEEYLVDEAM KLANGNQGIA ASLLGFTRQT LNKRLRKNRE NLP
|
|---|
| |