Gene Ppro_1984 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_1984 
Symbol 
ID4572256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand+ 
Start bp2126946 
End bp2127641 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content65% 
IMG OID639756030 
ProductABC transporter related 
Protein accessionYP_901650 
Protein GI118580400 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCAGA CAAAACCCGA CATCGTCCAG ATACGGAACC TCTCCAAATC CTATCGCAGG 
GGGAGCCAGA TCATCCCGGT GCTGGAGGAT ATCAGCTTCC ATATCCCCGA CGGCGAATTC 
CTGGCTCTGA TGGGGCCGTC CGGCTCGGGG AAGAGCACCC TGCTCAACCT GCTGGCCGGG 
ATAGACTGCG CCGACTCCGG CAGCATCCTG ATAGGCGGGG TGGATATAAC CACCCTGGCC 
GAGAGGGAAC TGGCCCGCTG GCGCTCCCTG CACGTCGGCT TCATCTTCCA GTTCTACAAC 
CTGATCCCGG TCCTGACCGC CTTCGAGAAC GTGGAGCTGC CGCTGCTCCT GACCCGCCTC 
TCCCGCGGGG AGCGGCGCGC CCATGTGGAG ACGGCCCTCA GGGTGGTGGG GCTTGGGGAC 
CGCATGGACC ACTATCCCTC CCAGCTTTCC GGCGGCCAGC AGCAGCGGGT CGCCATCGCC 
CGGGCAGTGG TCACCGACCC CACCATCCTG GTGGCCGACG AGCCCACCGG CGACCTTGAC 
CGCGGTTCGG CCGGCGAGGT CCTGGACCTT ATGGAGCGGC TCAACCGGGA ATCGGGCAAG 
ACGATCATCA TGGTCACCCA CGACCCCCGG GCAGCGGAGC GGGCCCGCGT GATCAGGTAT 
CTGGAAAAGG GCGAGCTGAG CGATGCATCT CGCTAA
 
Protein sequence
MNQTKPDIVQ IRNLSKSYRR GSQIIPVLED ISFHIPDGEF LALMGPSGSG KSTLLNLLAG 
IDCADSGSIL IGGVDITTLA ERELARWRSL HVGFIFQFYN LIPVLTAFEN VELPLLLTRL 
SRGERRAHVE TALRVVGLGD RMDHYPSQLS GGQQQRVAIA RAVVTDPTIL VADEPTGDLD 
RGSAGEVLDL MERLNRESGK TIIMVTHDPR AAERARVIRY LEKGELSDAS R