| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_1966 |
|---|
| Symbol | |
|---|
| ID | 4571791 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 2110817 |
|---|
| End bp | 2111266 |
|---|
| Gene Length | 450 bp |
|---|
| Protein Length | 149 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639756013 |
|---|
| Product | ferric uptake regulator family protein |
|---|
| Protein accession | YP_901633 |
|---|
| Protein GI | 118580383 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0735] Fe2+/Zn2+ uptake regulation proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.00359557 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACACCAC TCTCCAACAG CATAGATCAC CTGACCCAGA CTTTCCGCGA GTCAGGTTTG
CGTGTTACCC ATCAGCGGCT TGAGATTTAC CGGGAGCTGA TGGAGGCCAG GGATCATCCT
ACAGCTGAAC AACTGTATCG CAGGCTGCGC GGGCGAATCC CGACCCTCTC GCTGGATACG
GTCTACCGGA CCCTGACGAC TCTGGTCACC CATGGCATGG TCAAGCGCCT GGAGACGGTG
GAGAGTCAGG CGCGTTTCGA CACGACCCGG CAGCGCCACC ATCATATCAT CTGCAAGCGC
TGCAACGAAA TCATGGACTT CCACTGGCCG CTGCTGGATG AGACGCCGCT GCCGGGAGAG
GTGGATTCGT GGGGCAGGCT CGACGGAGTC AACGTGGTCG TGTACGGCGT CTGCGCCCGC
TGTCTTGCAG GAGACGCCCA ACCGACCTGA
|
|---|
| Protein sequence | MTPLSNSIDH LTQTFRESGL RVTHQRLEIY RELMEARDHP TAEQLYRRLR GRIPTLSLDT
VYRTLTTLVT HGMVKRLETV ESQARFDTTR QRHHHIICKR CNEIMDFHWP LLDETPLPGE
VDSWGRLDGV NVVVYGVCAR CLAGDAQPT
|
|---|
| |