Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_1879 |
Symbol | |
ID | 4571686 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | + |
Start bp | 2029150 |
End bp | 2030964 |
Gene Length | 1815 bp |
Protein Length | 604 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639755926 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_901547 |
Protein GI | 118580297 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATATTAC GCCAAAAGGC TGAAGAACGG CTGTTGGACA AAACAATTGA AGCTGACCCT TCTCATACAG AGATGGACTC ACAACGCCTG ATCCACGAAT TGCAGGTGTA CCAAATCGAA CTAGAGATGC AGGTAGAGGA ACTTCGCCAG GCTAGGGATG AGGAAGCTAT GGCGCGAGAG ATGTACGCCG ACCTCTACGA TTTCGCCCCG GTGGGATACG TTACCCTCGA CCGCGACGGG ATCATCCGAA ATGCAAACCT GACCGGCTCT GTTCTCTTGG GAGTCGTGCG CTCCCAGCTG ATCGGCCAGC GCCTTGGGGT TTTCGTCGCC GTTGTATCCC GTCCCGCTTT CGCCGACTTC CTCGAAAAGG TTTTTACGAG CCCGACCAAA GTGGCCTGCG AGGTGTCGCT CATGAAAGAG GGCGTTCCCG AGCTTTTCGT GCAGATCGAG GGGGTGGCCG TCGCATCGGG AGAGGAATGC CGGATTGGGT TGATTGACAT CACCGAACAT AAGCGGGCAG AAGAGGTGCT TTGGATGGCC AAGGAGGCTA CCGAAGCGGC AATTTTAGCC AAGGAGACAG CCAAGGCACT TCGCCTGGAG AAGGAGATAA GCGAGTCGCT TCGAAGGGAA AAAGAGGCAG CAGAGTCAGC TACTAGAGCA AAGGACCAGT TTCTTGCCAA CATGAGCCAC GAGCTGCGCA CCCCGATGAC AGGCGTTCTC GGCATGCTCC AACTCGCTCT AGAAGAAGAA CTCGCCCCGA CGCTACGTAA TTACCTGGGA ACAGCGCATA GTTCGGCCAA CTCTCTGCTC CAGATTCTTA ATGATATCCT CGACATGACC AAAATTGAAG CCGGAAAGAT CATCATCGAG GAAATGCCTT TCTCTCCACG GAGGTGCGTA ACTGGGGCAG TCGATATCAT TACTCCCGAA GTGCGGCGCA AGGGACTTGA CATCGCCATT TCGGTGGCGG AGGAAGTGCC AGATAAGCTT GTCGGGGACC AGATGCGACT ACGGCAAGTC CTCATCAACC TCATCGCCAA CGCCGTCAAG TTCACTAACG AGGGTAAGGT AGCCGTGCAA GTCACAGCAG GTGGGACGAA CTCCGACGGG AAGCGAGAGT ACACTTTCGC CGTTACGGAC ACCGGCATCG GCATCCCCGA AGACAAGAAA GACCTTCTCT TCCACGTATT CAGCCAGGTT GATGCATCTC ACACTCGCAC TTACGGCGGC ACGGGCCTTG GTCTTGCCAT CTGCAAGGAA CTTGTGGAAC TGATGGGGGG AATGATTGAT TTCGATAGCA AAGAGGGGGT GGGAAGCACC TTCTACTTCA CCATCTCACT AAGAGAAGCC AAATCAGAGA GAAATGCTCC GACCGCAGCC GAACCCCTGT CACCCGAAAC TTTTACTGCT CCGAAGGGGG AAAGGATTCC GCATCTCCTT CTTGCCGAAG ACGATCCGAC CATCCAACAA ATCCTCGAAA TGATGCTCAC GAAGTCGAAC TACAGTCTTG ATATCGCTAA GGATGGCAAG CAGGCGGTCG AAATGTGGGA ACAGGGAGAA TATGACCTCG TGCTGATGGA TGTCCAGATG CCTCTTCTCA GCGGCTTCGA TGTGACCCTA GCCATTCGGG AGAGAGAGAG AGAACGTGGC GGTCACACCC CCATCGTCGC CATGACGGCC CACACCGGCA AGGAAGCCGA GAAGAAGTGC ATCGCCGCAG GCATGGACCA CTATATTTCC AAGCCGATTG ACTTTAATGA GTGTTTGAAG TTGATAGGGC AGATCATCGG GCAGAAGTCC AGCGGCAATA ACTGA
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Protein sequence | MILRQKAEER LLDKTIEADP SHTEMDSQRL IHELQVYQIE LEMQVEELRQ ARDEEAMARE MYADLYDFAP VGYVTLDRDG IIRNANLTGS VLLGVVRSQL IGQRLGVFVA VVSRPAFADF LEKVFTSPTK VACEVSLMKE GVPELFVQIE GVAVASGEEC RIGLIDITEH KRAEEVLWMA KEATEAAILA KETAKALRLE KEISESLRRE KEAAESATRA KDQFLANMSH ELRTPMTGVL GMLQLALEEE LAPTLRNYLG TAHSSANSLL QILNDILDMT KIEAGKIIIE EMPFSPRRCV TGAVDIITPE VRRKGLDIAI SVAEEVPDKL VGDQMRLRQV LINLIANAVK FTNEGKVAVQ VTAGGTNSDG KREYTFAVTD TGIGIPEDKK DLLFHVFSQV DASHTRTYGG TGLGLAICKE LVELMGGMID FDSKEGVGST FYFTISLREA KSERNAPTAA EPLSPETFTA PKGERIPHLL LAEDDPTIQQ ILEMMLTKSN YSLDIAKDGK QAVEMWEQGE YDLVLMDVQM PLLSGFDVTL AIRERERERG GHTPIVAMTA HTGKEAEKKC IAAGMDHYIS KPIDFNECLK LIGQIIGQKS SGNN
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