| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_1877 |
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| Symbol | |
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| ID | 4571684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | - |
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| Start bp | 2023480 |
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| End bp | 2026998 |
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| Gene Length | 3519 bp |
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| Protein Length | 1172 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 639755924 |
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| Product | helicase domain-containing protein |
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| Protein accession | YP_901545 |
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| Protein GI | 118580295 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.464999 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTAAGC TGGAAGAAAT CCGTAAAAAC GCTGCCGTAA ATGGCATTGA GCCAGGACAG
ACCGTCCGAA TTGTCACGAC CGAACCAGTT GGAACAGACG CTCTCACTGT TTATTACAAG
ACATCAGATG GACGTGTTCT GGAAAGAATG CTGTTCCGAA CGGATGAGCT TCAGCTATCA
ATTACTAAAG CAGGTCGTCC ATGGTCCTTC GACGCAGACG GAGCAGATTT TAAAATAGCG
ACCGAGGCAT ACCGAATCAA TCTCGCCTAC CTCTTCGACA GTATGATGGC TGTTCATACT
TCAAACGTTC AGCCCCTTCC ACATCAAATC ACAGCCGTAT ATGAATCAAT GCTTCCCCGT
CAACCATTAA GGTATGTCCT TGCCGATGAT CCTGGTGCAG GTAAAACGGT CATGGCTGGC
TTATATATCC GTGAGCTTAT GATGCGGGCT GATGCACAAC GAGTCCTGAT TATTGCTCCG
GGTAGCCTGG TAGAACAATG GCAAGACGAA CTTTACGAAA AATTCGGACT CACATTCACC
ATATTTAGCC GTGAACTTGA ACAGCAGTCC CGAACTGGCA ATGCGTTTTA TGAAAACGAT
ACCCTTATTG CCCGTCTTGA CCAATTAAGC CGCAGTGAAG ACCTTCAAGA GAAGTTGACG
TCTGTAAACT GGGACTTGGT GATTTTCGAC GAGGCTCATA AGCTTTCTGC TACATGGTAC
GGTCAAAAAG TCACTGAAAC AAAACGTTTC AAATTGGCTA AGTTCCTTGG TTCAACTACC
CGCCATCTCT TACTGATGAC TGCTACACCG CATAACGGAA AAGAAGAAGA CTTCCAGCTA
TTCTTGTCAT TGCTCGATTC CGACCGGTTT TACGGCAAAT TCCGTGATGG CGCGCATAAG
GTTGATACTT CCGATTTAAT GCGGCGCATG GTCAAAGAGG AATTACTGAA ATTTGACGGG
ACAAAACTGT TCCCCGAACG TAGGGCCTAT ACTGCAAACT ACCAACTCTC AGAAATGGAG
GCTCGCCTTT ATCATTCAGT AACAGAATAC GTCAAAGAGG AAATGAACAA AGCTGATGAA
CTTGAAGGTG GACGCAGAGG CACCGTAGGA TTCGCCCTTA CTGCCCTTCA ACGTCGTCTT
GCGTCAAGCC CAGAAGCTAT TTATCAATCA CTTAAACGAC GTCATTTAAA GCTCAAGCGC
CGGGTAGCAG ATGAAAAACT TCGCCAACGC GGACAATTAC TGACGGAAGT GACTGGCTTT
GACGTACCGG AAAATATATA TGATTCCGCT GATGAAATGG GAGATGATGA ATACGAACGC
TTTGAAGAGG CTGTTGTTGA CCAAGCGACA GCAGCACAGA CTATCCAAGA ACTCGAAGTA
GAGATTCATA TTCTCGAAGG GCTTGTAAAT CAAGCAAGCG ACGTTGTTCA TTCCGGGCAA
GACCGCAAGT GGGAAGAGTT GTCAAACCTT CTCCAAAATA CCCCTGAAAT GCGAGACAAG
GATGGACGCC AGCGTAAACT CATCATCTTT ACGGAGCATA AGGACACGCT TCATTACCTC
GTAATGAAAA TTCGTGGTCT CATAGGGTCA GAAGACAGCG TTGTAACGAT ACATGGCGGA
GTAAAGCGTG ACGACCGCCG GAAAATTCAG GAATTGTTTA GAAACGACCC CGAAGTCAGG
GTTCTGGTTG CCACCGACGC TGCCGGTGAG GGTATCAACC TTCAGAACGC TAATTTAATG
GTCAATTATG ATCTTCCCTG GAATCCAAAT CGCCTGGAAC AACGCTTTGG TCGTATCCAC
CGTATCGGTC AAGATCAGGT CTGCCACTTG TGGAACATGG TGGCTAACGA AACCCGTGAA
GGAGATGTAT TCCAGCGCCT CCTGGATAAG CTCGAAATCG AACGACAAGC ACTTGGCGGG
AGAGTCTTCG ACATCCTTGG GGAAGTGTTT GAGAACAAGT CCCTCCGTGA ACTGCTGATT
GACGCAGTTC GTTATGGTGA CGACCCTATC CGCCAACTTG AGTTGAATCA TGTCGTTGAT
GAAGCACTCG ATACGACTCA CTTGCGGAAC ATTATGAATC GCAATGCTCT TTGTGAAGAG
ATCATGGATG AACAAAAGCT CTTTGCCGTC AAAGACGATA TGGAAAAGGC TGAAGCACGG
AAGCTGCAGC CATATTTCAT AAGAGCCTTC TTCAATCAGG CATTCAAACA ATTGGGTGGT
GAATTACGTC CGCGTGAAGC AGGTCGTTTT GAAATAATGA ACGTCCCCGC CATAATCCGT
GAGCGTGACC GTCAAATATC CGGTCGGGAC AGGTTTTCCC GCGACCCGGT GTTAAAACGC
TACGAAAGAG TCTGTTTTGA AAAACAGAAC ATTCGGATTA CCAGCAACAA GTCAATGGCG
AGTTTACTTC ATCCTGGTCA TCCCCTAATG CAATCAACGA TTGATTTGAT GCTTGAGGCT
CACCGGTCAA AACTGAAGCA AGGAGCAATT CTGGTTGACC ACGGTGACCC TGGTCTTGTT
CCGAAAGTAA TGTTCCTCAT TGACCATTCT GTTAGAGAGG GGAATCAGCC GGATAAGGCA
ATTTCACGAA GGATACAATT CGTAGAAATT GACCAGACCA GCAATGCAGT TAATGCCGGA
TGGGCACCTC ATCTCGACCT TGAACCGATT GAAAAGAGCG ACCTCGCCCT AATTGAAAAC
ATTCTAAATG GTGACTGGCT CAACAGAGAC CTTGAACAGG TTGCCCTGTC ATATGCTTCT
CAAAATATGA TTCCGATTCA TTTTGACGAG ATAAAAGCTC GGCGGGAGCG TCAGGTTGAC
AAGACGCTTT CTGCTGTCAA TGAACGCCTG GTTAAAGAAA TCAACTACTG GAGCGACCGT
TACATAAAGC TCCAAGACGA TGTAAACGCA GGAAGGCAAC CACGGGTTCA GCTTGAAAAT
GTCCGGCGGA CCATTGATGA ACTGACGGCA CGGCTTGAAA CAAGGAAGAA AGAGCTTGTG
GCAATGCGTC ATGTGATTTC ATCCACACCG TTAATTGTCG GCGGTGCTTT GGTTATCCCA
GCAGGTTTAC TTGCACAATG TAAAGGCAGC AATGAATTCT GTGCCGACGC TGAATCCCGT
GCAAGAGTTG AAATGGTTGC CATGCAAGCG GTAATGAATC TGGAAAGAAG CTTAGGGTAT
GAAGTTACTG ACGTATCTGC TGAAAAATGT GGGTGGGATG TCACGTCAAG ACCGCCCATG
AAGGATGGCA AAATCCCAGA AGTTCGTCAC ATTGAAGTAA AAGGTCGAGC AAAAGGTCAA
ACGACCATTA CCGTTACCAG GAATGAAATT CTATATGGCT TGAATCAATC GGACAAATTT
GTTCTTGCTG TGGTTCTGGT GGATGGTAAT AACCATGAAG GACCACATTA TATATGGAAT
CCATTCACCC ATGAACCAGA TTGGGGCGTT ACCAGCATCA ATTACGACCT GGCACAATTA
CTTGGAAAAG CACAAAACCC AAATTCAGTA ACGAACTAA
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| Protein sequence | MLKLEEIRKN AAVNGIEPGQ TVRIVTTEPV GTDALTVYYK TSDGRVLERM LFRTDELQLS
ITKAGRPWSF DADGADFKIA TEAYRINLAY LFDSMMAVHT SNVQPLPHQI TAVYESMLPR
QPLRYVLADD PGAGKTVMAG LYIRELMMRA DAQRVLIIAP GSLVEQWQDE LYEKFGLTFT
IFSRELEQQS RTGNAFYEND TLIARLDQLS RSEDLQEKLT SVNWDLVIFD EAHKLSATWY
GQKVTETKRF KLAKFLGSTT RHLLLMTATP HNGKEEDFQL FLSLLDSDRF YGKFRDGAHK
VDTSDLMRRM VKEELLKFDG TKLFPERRAY TANYQLSEME ARLYHSVTEY VKEEMNKADE
LEGGRRGTVG FALTALQRRL ASSPEAIYQS LKRRHLKLKR RVADEKLRQR GQLLTEVTGF
DVPENIYDSA DEMGDDEYER FEEAVVDQAT AAQTIQELEV EIHILEGLVN QASDVVHSGQ
DRKWEELSNL LQNTPEMRDK DGRQRKLIIF TEHKDTLHYL VMKIRGLIGS EDSVVTIHGG
VKRDDRRKIQ ELFRNDPEVR VLVATDAAGE GINLQNANLM VNYDLPWNPN RLEQRFGRIH
RIGQDQVCHL WNMVANETRE GDVFQRLLDK LEIERQALGG RVFDILGEVF ENKSLRELLI
DAVRYGDDPI RQLELNHVVD EALDTTHLRN IMNRNALCEE IMDEQKLFAV KDDMEKAEAR
KLQPYFIRAF FNQAFKQLGG ELRPREAGRF EIMNVPAIIR ERDRQISGRD RFSRDPVLKR
YERVCFEKQN IRITSNKSMA SLLHPGHPLM QSTIDLMLEA HRSKLKQGAI LVDHGDPGLV
PKVMFLIDHS VREGNQPDKA ISRRIQFVEI DQTSNAVNAG WAPHLDLEPI EKSDLALIEN
ILNGDWLNRD LEQVALSYAS QNMIPIHFDE IKARRERQVD KTLSAVNERL VKEINYWSDR
YIKLQDDVNA GRQPRVQLEN VRRTIDELTA RLETRKKELV AMRHVISSTP LIVGGALVIP
AGLLAQCKGS NEFCADAESR ARVEMVAMQA VMNLERSLGY EVTDVSAEKC GWDVTSRPPM
KDGKIPEVRH IEVKGRAKGQ TTITVTRNEI LYGLNQSDKF VLAVVLVDGN NHEGPHYIWN
PFTHEPDWGV TSINYDLAQL LGKAQNPNSV TN
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