| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_1873 |
|---|
| Symbol | |
|---|
| ID | 4574614 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 2013688 |
|---|
| End bp | 2015463 |
|---|
| Gene Length | 1776 bp |
|---|
| Protein Length | 591 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 639755921 |
|---|
| Product | UvrD/REP helicase |
|---|
| Protein accession | YP_901542 |
|---|
| Protein GI | 118580292 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.100548 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTCTTG CTAAATTAAA CCACGAGCAG AAGTTGGCCG TGAAGCAGGA AGGGCATGTA
TTATTGACGG CTTGTCCTGG AAGTGGGAAA ACACGAGTAT TAATCCATAA ACTTGCCTAC
AACCTCTCAA AGCTTCCTGA AAACAGCAAA AAGCGAATTG CCGCCGTAAC GTTCACAGTT
AGGGCTTCGG AAGAAATATT TAGGCGATTA AATGGGATAG GGATTAACAG CAATAATATC
TGGTCTGGCA CTCTTCATTC CTTTTGCTTT GAATGGATAA TAAAGCCTTA TTCATGTTAT
CTGCCAGAAT TGTCAAATGG GTTTGCAATA GCCGACGAAG CATTTTGTGC GGAATTGGTT
AGCAGCCTTA AAGACAAATA CAAGCTGAAG CAAATAGATC CGGTAAATTT CAGAATTAAT
AGAGATGGAA GTTATGTTGA AAATAAAAGT ATTCAACAGA AGCTAATTGC TGAGTATCAC
AGCATCCTTA TAAGTAACAA GCTCATAGAT TTTGAGCTAA TTTTGTATTA TTCATACAAA
TTGCTTGTCA CCTACCCGAA TATCCAAATT ACATTATCAA ATATATTTGA ACTGATATGT
GTTGATGAAT ACCAGGATAC TCAGGATTTA CTTTATGCAA TTATCTCGGT AATTATCAAG
GCAGGTAACG GAAAGACATC TTTATTTTTT GTCGGGGATA CTGACCAAGC TATCTACGCT
TCGCTCGGTG GTGTGGCAAA AAGTTTACAG GAAATTAAAG CCGAAATAGA CAATATGCCA
ATAACTCACT TGACTCTTAC CGGAAACTAT CGGTCAAGCC AAAGAATTAT TGATTTTTAC
TCAAATTTTC AAACTCAAAA GTATCAGATT CATGCTGTCG GAAAAAACGC CAAGGAAGAA
GGGCTTATAA CGTTCAATTC AGATATTCAT CATTCAAATA TTGTTGATGA AATTGCGAAA
TTGATTCAAT TAAGTTTAGA CACAGGCATT CCAGAAAACG AAATTTGTGT TCTCGTTCCT
CAATGGTGGT TAATAACGAT TGTTACGAAG AAATTGCGTG CATCATTGCC AGGTGTGAGT
TTTGACGCAT CCGGGTTAGC ACCCATGTCA AAAAACAGAG AAAATATTTG GTATAAACTA
TCACGTCTTT TGCTTACTGA ACCAAATCCG AAAATTTATT CTTCAAGGTA CAGATGGGCA
ACTGATTTAA TTGATAGTTT CCGTGTTGAC ACAAATACTG AATTCAATGA ACTTTATAAA
AATGAACGTG ACCTGTTGAG GCTTATTAAT TCCATAAAGT CTTCTGAAAT GGAAGGTATT
GATTATTTAA ACGATTGTTT TGACCAATTT CTGCAAATCA TAGGCATCGA CCAGCTTAAA
TATCCACAAC TTGTAGAACA CAGGAACCTG TTCTTCGATA ATATTGATAA AAGATTGAAT
GACGATACCT TTAAGGTGCC AAGTGATATT CAATCATTCA AAAGTTTTTA CAGGGAAATG
ACAGGCGTAA TAATCAATAC ATGTGTTGGT GTAAAAGGCG AAGAGTTTGA TACGGTCATT
TCCTATGGAC TGTTAAACGG CTACGTCCCT CATTGGAATG ATATTTTTTC CGGCAGGGCA
TCTGATGCAG CAAAAAAATT GTTATATGTT ATTTGTTCAC GAGCCAAGAA GAATTTACAC
CTGATAAGTG AAATTGGCAG GACAACGAAA AGTGGGTCTG ATTTAGGCAT TACGCCCGAG
CTAAAATGCA TCAAATTCGA GTATGATGTT GTCTAA
|
|---|
| Protein sequence | MILAKLNHEQ KLAVKQEGHV LLTACPGSGK TRVLIHKLAY NLSKLPENSK KRIAAVTFTV
RASEEIFRRL NGIGINSNNI WSGTLHSFCF EWIIKPYSCY LPELSNGFAI ADEAFCAELV
SSLKDKYKLK QIDPVNFRIN RDGSYVENKS IQQKLIAEYH SILISNKLID FELILYYSYK
LLVTYPNIQI TLSNIFELIC VDEYQDTQDL LYAIISVIIK AGNGKTSLFF VGDTDQAIYA
SLGGVAKSLQ EIKAEIDNMP ITHLTLTGNY RSSQRIIDFY SNFQTQKYQI HAVGKNAKEE
GLITFNSDIH HSNIVDEIAK LIQLSLDTGI PENEICVLVP QWWLITIVTK KLRASLPGVS
FDASGLAPMS KNRENIWYKL SRLLLTEPNP KIYSSRYRWA TDLIDSFRVD TNTEFNELYK
NERDLLRLIN SIKSSEMEGI DYLNDCFDQF LQIIGIDQLK YPQLVEHRNL FFDNIDKRLN
DDTFKVPSDI QSFKSFYREM TGVIINTCVG VKGEEFDTVI SYGLLNGYVP HWNDIFSGRA
SDAAKKLLYV ICSRAKKNLH LISEIGRTTK SGSDLGITPE LKCIKFEYDV V
|
|---|
| |