Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_1871 |
Symbol | |
ID | 4574612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | - |
Start bp | 2012572 |
End bp | 2013363 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639755919 |
Product | DNA/RNA non-specific endonuclease |
Protein accession | YP_901540 |
Protein GI | 118580290 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1864] DNA/RNA endonuclease G, NUC1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000105859 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATACGTC CTTATCTATT GTCAATTACA GCATTATTGC TGAGTGCCGG AATTGCGTTC GCTGCTGACA CCTCGTGCCC TGAACATTTT ACCGGTGGAA AAGCACCTGA CATCATCAAT CAGAAAATGA CCGCCAAGAC CCTTGAAATC TGTTATTCGG GTTATGCGCT CAAGCATTCC GGCATTACCC GCACTCCACT TTACTCAGCA GAACACCTGA CCCGAGAACG CATGCTTCAT GGCAAGGGGC TTAAGCGCCA AAGCAAGTTC TTCCCGGATA CCAACATCCC CGCTTCTGAA AGAGCGGAAC TCCATCATTA TGCGCGGTCA GGTTATGACC GTGGCCATGT TGCGCCTTCT GCAGATATGT TCGATATACA ATCGCAGCAA GAGTGTTTCA GCCTTGCCAA CATGGTTCCG CAAGTTCCAG AGAACAACCG TGGCCCCTGG GAAGGTATTG AATCTACGAT TCGGAAAATG GCCAAAGACC GAGGCGACAT CTATGTTGTC ACCGGCCCGA TTTACCAGGG TGAAATTCAG AAAATAGGCG GCGCCGTCAT GGTGCCGACC AAACTCTTCA AAGCGGTGTA TGACCCGCAT CGTCAGGAAT CAGGAGCTTA TCTGATAGAC AATACTGCAG ATGCGCAACC TGAGAAAATC AGTGTCGCGG ACTTGGAGAA GATTACCGGA ATCAGCCTGT TCCCAGCAGT CGGTGACGCT ACAAAATCTC TACTCATGCG CCTACCTGAA CCGAAGTCAT ATAAGGAACG GAAGCGGAAA GGTGATCGGT GA
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Protein sequence | MIRPYLLSIT ALLLSAGIAF AADTSCPEHF TGGKAPDIIN QKMTAKTLEI CYSGYALKHS GITRTPLYSA EHLTRERMLH GKGLKRQSKF FPDTNIPASE RAELHHYARS GYDRGHVAPS ADMFDIQSQQ ECFSLANMVP QVPENNRGPW EGIESTIRKM AKDRGDIYVV TGPIYQGEIQ KIGGAVMVPT KLFKAVYDPH RQESGAYLID NTADAQPEKI SVADLEKITG ISLFPAVGDA TKSLLMRLPE PKSYKERKRK GDR
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