| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_1830 |
|---|
| Symbol | |
|---|
| ID | 4572810 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | + |
|---|
| Start bp | 1970002 |
|---|
| End bp | 1971153 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639755879 |
|---|
| Product | cystathionine gamma-synthase |
|---|
| Protein accession | YP_901500 |
|---|
| Protein GI | 118580250 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.956648 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACATCG ATACGCAGGC GGTCCAGACC GGACTGGAGT GGGACACGCG AACAGGGGCG
CTCTCGATCC CCATCTACCA GTCAGCCACC TTCCGGCATC CGGGGCTTGG CCAGAGCACC
GGCTTCGACT ACAGCCGCTC GGGCAACCCC ACCCGCCTGG CGCTGGAGCA GGGCATCGCC
CGCATGGACG GCGGCTCCAG GGGCTTCGCC TTTTCCTCGG GCATGGCGGC CATCACCAGC
CTGCTGCTGC TCTTTCAGGA GGGGGATCAC CTGGTGGTCA CCGAAGACCT GTACGGCGGA
ACCTGTCGCC TGTTCGACAG GATCTTCACC CGCTTCGGCC TCTCCTTCAG CTATGTGGAT
ACCACCGACA GGGAGGAGGT GCTGGCGGCC ATAACCCCTT CCACCAAGGC GCTGTTCGTG
GAGACGCTCA CCAACCCGCT GCTTAAATTC GCCGACATCC CTGCCCTCTC CACCATCTGC
CACGAGCGGG GACTGCTGCT GATCGCCGAC AACACCTTCC TGACCCCCTA CCTGCTGCGT
CCCCTGGAAC GTGGGGCCGA CATCACCGTC TACAGTGCCA CCAAGTATCT GTCGGGCCAC
AACGACACGG TGGCCGGCCT GGCGGTTGTC AGGGATCCGC AGTTGGCCGA ACAGGTCTAC
TTCCACCAGA ACTCGGCCGG GGCCGTGCTG GGACCACAGG ACTCCTGGCT GGTGATCCGC
GGCATGAAGA CTCTGGGGGT GCGCCTTGAC CGGCAGCAGG AAAACGCCCT GAAGATCGCC
CGCTGGCTGC AACGGCACCC CCAGGTCACC AGGGTCCATT ACCCCGGCCT GGAGGAGCAC
CCCGATCATG ATCTGATCAG GCGCCATGCC CGGGGCTTCG GCGCCATGAT CGCCTTCGAG
GTCGAAAGCC ACAGCCTGGT GGAGCAGCTC CTGCTCAGGA CCCAGCTGAT CTCCTTTGCC
GAAAGCCTGG GTGGGGTGGA AACTCTGATG ACCTTCCCCG AGGGGCAGAC CCATGCGGAC
ATTCCGCCGG AACTGCGTGC CCGACTGGGC ATCAACGACG TGCTGCTGCG CCTTTCGGTG
GGCATCGAGA ATGTTGACGA TCTGATCGAC GACCTGAACC AGGCATTCAA CAAGAGGGAG
ACAACCGTAT GA
|
|---|
| Protein sequence | MNIDTQAVQT GLEWDTRTGA LSIPIYQSAT FRHPGLGQST GFDYSRSGNP TRLALEQGIA
RMDGGSRGFA FSSGMAAITS LLLLFQEGDH LVVTEDLYGG TCRLFDRIFT RFGLSFSYVD
TTDREEVLAA ITPSTKALFV ETLTNPLLKF ADIPALSTIC HERGLLLIAD NTFLTPYLLR
PLERGADITV YSATKYLSGH NDTVAGLAVV RDPQLAEQVY FHQNSAGAVL GPQDSWLVIR
GMKTLGVRLD RQQENALKIA RWLQRHPQVT RVHYPGLEEH PDHDLIRRHA RGFGAMIAFE
VESHSLVEQL LLRTQLISFA ESLGGVETLM TFPEGQTHAD IPPELRARLG INDVLLRLSV
GIENVDDLID DLNQAFNKRE TTV
|
|---|
| |