| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_1811 |
|---|
| Symbol | |
|---|
| ID | 4572602 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 1939716 |
|---|
| End bp | 1942505 |
|---|
| Gene Length | 2790 bp |
|---|
| Protein Length | 929 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639755860 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_901481 |
|---|
| Protein GI | 118580231 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAACTA TCGACCTGTC GCGGGACGCG ACCGATTTCA GAAAACAGTA TGCCGGCGTG
CGCATGCAGC AGGGAAGGGT ACTGACCGAC GATGACTTCA ACGAGGCCGC GCGCCTGGAT
GCCGAGGCAC TGCGCCGCAC CCGGCTGGAG ACCATCGGCC CCTACGGTTC ATGCGACAGC
GGCTTCCTCC CCGCCAACCT GGGCACCTTC CAGGGGAGGG TGACCTTCGA CCTGAGCGCC
GGCAGCCTGG AGCTGGGGGG GCTGCGCCTG GAGCTTCCCG GCGACGAACA GTTCCATCAG
CAGAAGAACT GGCTCGACTT CGAACCCGGT GCCGACGCTC CCCTCCCTCC CCAGGGCGGG
AAATCCCGCG TGGATCTGAT CTGGATCGAG GCCTGGCAGC AACCGGTAAG CGCAGTGGAG
GACCGGGAGC TGTTCGAGGT GGCCCTGGGC GGGCCGGACA CCAGCACCCG CATCCGCACC
ATGCAGCGGG TCAGAATCAT GCCCGACGTG GGCAGCGGCG ACTGCGGCGA GGCCTGGCAC
AGGGCCTGCC TGAGCTGGTC CCAGCTGGGG AGCATGGCCG AAGACATGGA GCTCGTGCCA
CAAAGCCGCC TGAAAGTGAC GTTTACGGAA CCGTCGTCCA GCGCAAGCCT CTGCTCTCCC
GGACTGTCCG GCGGTTACCT GGGAGCCGAG AATCAGGCCA TCCGCGTTCA GGCGGTCAGC
GCCACCCACT TCACCTGGGG CTTTGACAAT GCGGCGCCGC TCTACCGCGC CGTGCTGATG
AGCGAGGGAG GCTCGCGGGT CAGGCTGAGG CTGCTCACCC AACCGAAAGA TGCCGTGCAC
TGGCCGCTCA AGGGGCAGGT GGTGGAGCTG CTGCCCTGGG GAGCGGCCCT CCCCAACGGG
GAGCGGGTGG CGGAGATCGG CGGTCATTTC AGCAGGGTGG CATCAAGCTA TGAACCGGAC
AGCCAGGAAT TCACCATCAC GACGGCGCCA GCGGCCGGTT TCGACAGCCG CTGGGAGAAC
CGCACGGATA AAGGGAACTT TTATACCCCC AGCATCGTCA ATGGCGTGGA TCAGGAACGC
TTCGTGTATC TGCGCATCTG GAATCGCGGC GAGGACCTGA CATCGCCCGC GCTGATGCCG
CTGGCCTCCG GGAATCTGGG GCAGAGCGGC CTTGCGGTCA GCTTCCAGGC CCCCCCCCGG
GCCGGGGACT ACTGGATCAT AGCCGCCCGC CCCTCCGCAC CCGACGTGGT TACCCCCTGG
TCGTTCACCA GGGGGGAGGG TGCCCGTCCC AACGGCATCC GGCGCTACCG CGCCCCCCTG
GCGCTGGTGA AGTGGCTTCC CGGCGGTGGC GCCAGAATAC TCGACTGCCG CCCCTCCTTC
CGTCCCCTGA CCAGCCAGAC GCGCTGCTGC GTTGATCTGG TGGCCACACC GGGGCAGGGC
TGGGAGCGGA TCTTCGAACG CATACCGGAG AAGGGGGACG CGGTGATCTG TTTTCCCGCG
GGGCAGTATC CCCTGGAGAC GACGGTGGTG GTGGTCAACC GGGGCAGGCT GCGCCTGAAC
GGCGCCGGTC CTGCCTCGCG CATCCACGGC ATTGGGCTGA ACACCCTGCT GCTGTTCAAA
AACTGCGATG CCGTGGATCT GCGCGACCTG TACTGTCTCG GCGGCAATGT GTCGGCTGAC
GGCCTCTTCG GCACGGTGTG CTGCGAAGAG ACGCGCCAGG TGTACCTCTC CCGCGTGGCG
CTGCGCTGCA AGGGGGGACG GGAGCGACGG GTGGCCTGCC TGCGGGTCAT GAACACCCCG
GGCTCTCACT CGGCCCGCAG CTGCCGCGTG ACGATCGACA CGTGCGACAT CTACGTTGGC
CACTTGCAGA CCGGCCTGCT TCTGCTGAAC ACCAGCCAGG TCGTGCTGCG CCACAGCCGC
ATCCTCCCCG CCGGCACCAC CGTGGAGCGC GTTGGCAAGG CCCTGGCCAG CCGCAGGTTC
CGCGATAACC TGGCCCAGTC GGCGCTGCTG CTGGTCAAGG AGGGGGAGCC TCCCCTGGCG
GATGGCTTCC GCTACAAGAT CAAGGTGAGG GATGGCCAGG TCGTGCAGTG CTGGATCGAC
ACCGCGTTCA GGACGTACCT GAAGGAGGCG GTGGAAAGCG ACAAGAGGAT CCCCGGCTTC
CGTGTCACCC AGGATGGGCA GCCCGGCCAG GAGGGGTTCC TGCGCATCCA CATCATGCGC
CGCCTGCGCC GAGTTCTGGG GTCGACGCGG GCCCGCAACG CCAACGCTGC CCTGGGGGAA
TGGCTGAACG CCATCGATTC GGCCGCCCGG GCCGTCATCG GCCAGGGGGT GGTGGTGGCC
GGCAGGGAGG CGGGCCAGGT GATCGTCGAG TCCACCGTTA TCAGAAACGC GGTGCAGGGG
GTCCATGTGG GGGTCAGCCA TGCAGGACCC AACCGTACCG GCAAGGGGGC TGACCGCGCC
GGTCGGGTGA TCGTACGGCA GAACGAGATC CATACCCTGC TGGCCGCCGG CGGCCCCCTG
GAACGCCACG CTATTTTCGT GGGCAATGCC GCCAGCGTAA CCATCGCCGA CAACCACCTT
TCCCTGGAAC GCCCGGCAGG CCTGGGGCAC CTGCCGGTGG ACGGCATCCG CGTCTTCGGT
TTCCTGGGGG AGATGGTCAG CATCCAGGGG AACCACATCA CCGGCTACTC CACCTCCCTG
CGCCGGGCTC AGCGGGGAAG GGAGCCCCAG GGCGCCGTGA GGAGCGAACG CGACAACTAC
CACGACGGAG AGATTCTGCT CCAGAGCTAG
|
|---|
| Protein sequence | MSTIDLSRDA TDFRKQYAGV RMQQGRVLTD DDFNEAARLD AEALRRTRLE TIGPYGSCDS
GFLPANLGTF QGRVTFDLSA GSLELGGLRL ELPGDEQFHQ QKNWLDFEPG ADAPLPPQGG
KSRVDLIWIE AWQQPVSAVE DRELFEVALG GPDTSTRIRT MQRVRIMPDV GSGDCGEAWH
RACLSWSQLG SMAEDMELVP QSRLKVTFTE PSSSASLCSP GLSGGYLGAE NQAIRVQAVS
ATHFTWGFDN AAPLYRAVLM SEGGSRVRLR LLTQPKDAVH WPLKGQVVEL LPWGAALPNG
ERVAEIGGHF SRVASSYEPD SQEFTITTAP AAGFDSRWEN RTDKGNFYTP SIVNGVDQER
FVYLRIWNRG EDLTSPALMP LASGNLGQSG LAVSFQAPPR AGDYWIIAAR PSAPDVVTPW
SFTRGEGARP NGIRRYRAPL ALVKWLPGGG ARILDCRPSF RPLTSQTRCC VDLVATPGQG
WERIFERIPE KGDAVICFPA GQYPLETTVV VVNRGRLRLN GAGPASRIHG IGLNTLLLFK
NCDAVDLRDL YCLGGNVSAD GLFGTVCCEE TRQVYLSRVA LRCKGGRERR VACLRVMNTP
GSHSARSCRV TIDTCDIYVG HLQTGLLLLN TSQVVLRHSR ILPAGTTVER VGKALASRRF
RDNLAQSALL LVKEGEPPLA DGFRYKIKVR DGQVVQCWID TAFRTYLKEA VESDKRIPGF
RVTQDGQPGQ EGFLRIHIMR RLRRVLGSTR ARNANAALGE WLNAIDSAAR AVIGQGVVVA
GREAGQVIVE STVIRNAVQG VHVGVSHAGP NRTGKGADRA GRVIVRQNEI HTLLAAGGPL
ERHAIFVGNA ASVTIADNHL SLERPAGLGH LPVDGIRVFG FLGEMVSIQG NHITGYSTSL
RRAQRGREPQ GAVRSERDNY HDGEILLQS
|
|---|
| |